Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:98742797-98901508

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arf3 15 98737624 to 98763118 25494 - protein coding gene ADP-ribosylation factor 3
Tssr136279 15 98755067 to 98755106 39 - TSS region transcription start site region 136279
5830427D03Rik 15 98760136 to 98762051 1915 unclassified gene RIKEN cDNA 5830427D03 gene
Cpgi7668 15 98762253 to 98763587 1334 CpG island CpG island 7668
Tssr136280 15 98763136 to 98763190 54 - TSS region transcription start site region 136280
Tssr136281 15 98763195 to 98763220 25 - TSS region transcription start site region 136281
Tssr136282 15 98763227 to 98763238 11 - TSS region transcription start site region 136282
Wnt10b 15 98770712 to 98778150 7438 - protein coding gene wingless-type MMTV integration site family, member 10B
Cpgi7669 15 98772355 to 98773032 677 CpG island CpG island 7669
Cpgi7670 15 98776002 to 98778593 2591 CpG island CpG island 7670
Tssr136283 15 98778528 to 98778541 13 - TSS region transcription start site region 136283
Tssr136284 15 98778545 to 98778568 23 - TSS region transcription start site region 136284
Cpgi7671 15 98778968 to 98779129 161 CpG island CpG island 7671
Cpgi7672 15 98789309 to 98790353 1044 CpG island CpG island 7672
Tssr132963 15 98789839 to 98789850 11 + TSS region transcription start site region 132963
Wnt1 15 98789857 to 98793830 3973 + protein coding gene wingless-type MMTV integration site family, member 1
Tssr132964 15 98790000 to 98790017 17 + TSS region transcription start site region 132964
Cpgi7673 15 98790735 to 98793222 2487 CpG island CpG island 7673
Cpgi7674 15 98797980 to 98798223 243 CpG island CpG island 7674
Ddn 15 98803782 to 98807925 4143 - protein coding gene dendrin
Tssr136285 15 98803800 to 98803804 4 - TSS region transcription start site region 136285
Cpgi7675 15 98804051 to 98804578 527 CpG island CpG island 7675
Tssr136286 15 98804090 to 98804114 24 - TSS region transcription start site region 136286
Cpgi7676 15 98805062 to 98808362 3300 CpG island CpG island 7676
B130046B21Rik 15 98807024 to 98816077 9053 + antisense lncRNA gene RIKEN cDNA B130046B21 gene
Tssr136287 15 98807890 to 98807908 18 - TSS region transcription start site region 136287
Tssr136288 15 98807910 to 98807932 22 - TSS region transcription start site region 136288
Tssr136289 15 98807940 to 98807956 16 - TSS region transcription start site region 136289
Tssr136290 15 98807962 to 98807976 14 - TSS region transcription start site region 136290
Tssr136291 15 98807995 to 98808002 7 - TSS region transcription start site region 136291
Tssr136292 15 98808306 to 98808318 12 - TSS region transcription start site region 136292
Tssr136293 15 98809487 to 98809492 5 - TSS region transcription start site region 136293
Prkag1 15 98812797 to 98831508 18711 - protein coding gene protein kinase, AMP-activated, gamma 1 non-catalytic subunit
Cpgi7677 15 98830743 to 98831673 930 CpG island CpG island 7677
Tssr132965 15 98830853 to 98830865 12 + TSS region transcription start site region 132965
Tssr136294 15 98831316 to 98831358 42 - TSS region transcription start site region 136294
Tssr136295 15 98831436 to 98831450 14 - TSS region transcription start site region 136295
Tssr136296 15 98831452 to 98831488 36 - TSS region transcription start site region 136296
Tssr136297 15 98831498 to 98831509 11 - TSS region transcription start site region 136297
Kmt2d 15 98831669 to 98871204 39535 - protein coding gene lysine (K)-specific methyltransferase 2D
Tssr136298 15 98832103 to 98832107 4 - TSS region transcription start site region 136298
Tssr136299 15 98832475 to 98832480 5 - TSS region transcription start site region 136299
Tssr132966 15 98835950 to 98835952 2 + TSS region transcription start site region 132966
Tssr136300 15 98845603 to 98845629 26 - TSS region transcription start site region 136300
Tssr136301 15 98845729 to 98845743 14 - TSS region transcription start site region 136301
Tssr136302 15 98845760 to 98845772 12 - TSS region transcription start site region 136302
Tssr136303 15 98845779 to 98845794 15 - TSS region transcription start site region 136303
Tssr136304 15 98846128 to 98846146 18 - TSS region transcription start site region 136304
Tssr136305 15 98846174 to 98846199 25 - TSS region transcription start site region 136305
Tssr136306 15 98846295 to 98846309 14 - TSS region transcription start site region 136306
Tssr136307 15 98862904 to 98862918 14 - TSS region transcription start site region 136307
Tssr136308 15 98863937 to 98863960 23 - TSS region transcription start site region 136308
Tssr136309 15 98863988 to 98864007 19 - TSS region transcription start site region 136309
Tssr136310 15 98867423 to 98867434 11 - TSS region transcription start site region 136310
Cpgi7678 15 98870821 to 98872587 1766 CpG island CpG island 7678
Tssr132967 15 98871015 to 98871046 31 + TSS region transcription start site region 132967
Tssr136311 15 98871175 to 98871187 12 - TSS region transcription start site region 136311
Tssr136312 15 98871966 to 98872003 37 - TSS region transcription start site region 136312
Tssr136313 15 98872158 to 98872184 26 - TSS region transcription start site region 136313
Tssr136314 15 98872186 to 98872233 47 - TSS region transcription start site region 136314
Gm49437 15 98872329 to 98872613 284 - unclassified gene predicted gene, 49437
5730414N17Rik 15 98872644 to 98874082 1438 + lincRNA gene RIKEN cDNA 5730414N17 gene
Rhebl1 15 98877760 to 98881497 3737 - protein coding gene Ras homolog enriched in brain like 1
Cpgi7679 15 98880851 to 98881587 736 CpG island CpG island 7679
Tssr136315 15 98881220 to 98881240 20 - TSS region transcription start site region 136315
Tssr136316 15 98881255 to 98881316 61 - TSS region transcription start site region 136316
Tssr136317 15 98881361 to 98881381 20 - TSS region transcription start site region 136317
Tssr136318 15 98881388 to 98881410 22 - TSS region transcription start site region 136318
Dhh 15 98891152 to 98898540 7388 - protein coding gene desert hedgehog
Tssr136319 15 98892188 to 98892192 4 - TSS region transcription start site region 136319
Gm49442 15 98893351 to 98895175 1824 + antisense lncRNA gene predicted gene, 49442
Cpgi7680 15 98893352 to 98895280 1928 CpG island CpG island 7680
Tssr136320 15 98895411 to 98895432 21 - TSS region transcription start site region 136320
Cpgi7681 15 98895442 to 98896001 559 CpG island CpG island 7681
Cpgi7682 15 98897632 to 98898566 934 CpG island CpG island 7682
Tssr136321 15 98898458 to 98898467 9 - TSS region transcription start site region 136321
Tssr136322 15 98898483 to 98898558 75 - TSS region transcription start site region 136322