Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:98248445-98566135

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
H1fnt 15 98255986 to 98257293 1307 - protein coding gene H1 histone family, member N, testis-specific
Cpgi7649 15 98256763 to 98257183 420 CpG island CpG island 7649
Tssr136230 15 98257296 to 98257312 16 - TSS region transcription start site region 136230
Tssr136231 15 98257409 to 98257432 23 - TSS region transcription start site region 136231
Tssr132935 15 98265582 to 98265602 20 + TSS region transcription start site region 132935
Gm33967 15 98265589 to 98286206 20617 + lncRNA gene predicted gene, 33967
Zfp641 15 98285585 to 98296161 10576 - protein coding gene zinc finger protein 641
Cpgi7650 15 98295437 to 98296496 1059 CpG island CpG island 7650
Tssr136232 15 98296114 to 98296157 43 - TSS region transcription start site region 136232
Olfr285 15 98312589 to 98313548 959 - protein coding gene olfactory receptor 285
Olfr284 15 98340022 to 98340939 917 - protein coding gene olfactory receptor 284
Cpgi7651 15 98378110 to 98378389 279 CpG island CpG island 7651
Olfr283 15 98378179 to 98379108 929 - protein coding gene olfactory receptor 283
Gm49443 15 98384007 to 98384267 260 + pseudogene predicted gene, 49443
Tssr132936 15 98398413 to 98398424 11 + TSS region transcription start site region 132936
Tssr132937 15 98398436 to 98398450 14 + TSS region transcription start site region 132937
1700031M16Rik 15 98398445 to 98416135 17690 + protein coding gene RIKEN cDNA 1700031M16 gene
Gm21022 15 98419951 to 98421160 1209 + pseudogene predicted gene, 21022
Olfr282 15 98437470 to 98438397 927 + protein coding gene olfactory receptor 282
Gm6979 15 98450358 to 98450844 486 + pseudogene predicted gene 6979
Cpgi7652 15 98456278 to 98456806 528 CpG island CpG island 7652
Olfr281 15 98456312 to 98457247 935 + protein coding gene olfactory receptor 281
Olfr240-ps1 15 98471419 to 98471885 466 + pseudogene olfactory receptor 240, pseudogene 1
Olfr280-ps1 15 98475195 to 98475484 289 + pseudogene olfactory receptor 280, pseudogene 1
Lalba 15 98480400 to 98482721 2321 - protein coding gene lactalbumin, alpha
Tssr136233 15 98480663 to 98480680 17 - TSS region transcription start site region 136233
Tssr132938 15 98481525 to 98481532 7 + TSS region transcription start site region 132938
Tssr136234 15 98481967 to 98481970 3 - TSS region transcription start site region 136234
Tssr136235 15 98482183 to 98482193 10 - TSS region transcription start site region 136235
Tssr136236 15 98482207 to 98482231 24 - TSS region transcription start site region 136236
Tssr136237 15 98482686 to 98482705 19 - TSS region transcription start site region 136237
Tssr136238 15 98482731 to 98482742 11 - TSS region transcription start site region 136238
Tssr136239 15 98482777 to 98482784 7 - TSS region transcription start site region 136239
Tssr132939 15 98492397 to 98492402 5 + TSS region transcription start site region 132939
Olfr279 15 98497474 to 98498406 932 + protein coding gene olfactory receptor 279
Cpgi7653 15 98497612 to 98498382 770 CpG island CpG island 7653
Olfr278-ps1 15 98499405 to 98499642 237 + pseudogene olfactory receptor 278, pseudogene 1
Cpgi7654 15 98510575 to 98510851 276 CpG island CpG island 7654
Kansl2 15 98517658 to 98534264 16606 - protein coding gene KAT8 regulatory NSL complex subunit 2
Snora34 15 98519717 to 98519834 117 - snoRNA gene small nucleolar RNA, H/ACA box 34
Mir1291 15 98519762 to 98519878 116 - miRNA gene microRNA 1291
Tssr136240 15 98523765 to 98523793 28 - TSS region transcription start site region 136240
Snora2b 15 98526348 to 98526459 111 - snoRNA gene small nucleolar RNA, H/ACA box 2B
Tssr136241 15 98529040 to 98529043 3 - TSS region transcription start site region 136241
Tssr132940 15 98532595 to 98532612 17 + TSS region transcription start site region 132940
Cpgi7655 15 98533225 to 98534552 1327 CpG island CpG island 7655
Tssr136242 15 98533932 to 98533950 18 - TSS region transcription start site region 136242
2610028H08Rik 15 98534003 to 98534746 743 unclassified gene RIKEN cDNA 2610028H08 gene
Tssr136243 15 98534231 to 98534305 74 - TSS region transcription start site region 136243
Tssr132941 15 98534499 to 98534537 38 + TSS region transcription start site region 132941
Tssr132942 15 98541384 to 98541389 5 + TSS region transcription start site region 132942
Tssr136244 15 98542621 to 98542625 4 - TSS region transcription start site region 136244
Ccnt1 15 98542768 to 98567772 25004 - protein coding gene cyclin T1
Tssr136245 15 98543907 to 98543924 17 - TSS region transcription start site region 136245
Tssr136246 15 98543972 to 98543989 17 - TSS region transcription start site region 136246
Tssr136247 15 98564438 to 98564442 4 - TSS region transcription start site region 136247