Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:97895601-98095603

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vdr 15 97854427 to 97908296 53869 - protein coding gene vitamin D (1,25-dihydroxyvitamin D3) receptor
Cpgi7637 15 97907830 to 97908860 1030 CpG island CpG island 7637
Tssr136185 15 97908261 to 97908316 55 - TSS region transcription start site region 136185
Tssr132905 15 97908408 to 97908436 28 + TSS region transcription start site region 132905
Tssr136186 15 97910602 to 97910617 15 - TSS region transcription start site region 136186
Tssr136187 15 97910622 to 97910641 19 - TSS region transcription start site region 136187
Gm22202 15 97935285 to 97935595 310 + unclassified non-coding RNA gene predicted gene, 22202
D15Mit193 15 97941759 to 97941887 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 193
D15Mit149 15 97941786 to 97941909 123 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 149
D15Jpk1 15 97943148 to 97943310 162 DNA segment DNA segment, Chr 15, Japan, Kominami 1
Cpgi7638 15 97963742 to 97964884 1142 CpG island CpG island 7638
Tssr136188 15 97964034 to 97964077 43 - TSS region transcription start site region 136188
Tmem106c 15 97964200 to 97970275 6075 + protein coding gene transmembrane protein 106C
Tssr132906 15 97964220 to 97964271 51 + TSS region transcription start site region 132906
Tssr132907 15 97964277 to 97964306 29 + TSS region transcription start site region 132907
Tssr132908 15 97964311 to 97964326 15 + TSS region transcription start site region 132908
Tssr132909 15 97969814 to 97969833 19 + TSS region transcription start site region 132909
Col2a1 15 97975602 to 98004695 29093 - protein coding gene collagen, type II, alpha 1
Tssr132910 15 97975603 to 97975630 27 + TSS region transcription start site region 132910
Tssr136189 15 97975668 to 97975687 19 - TSS region transcription start site region 136189
Tssr136190 15 97975699 to 97975717 18 - TSS region transcription start site region 136190
Tssr136191 15 97975912 to 97975921 9 - TSS region transcription start site region 136191
Tssr136192 15 97976018 to 97976051 33 - TSS region transcription start site region 136192
Tssr136193 15 97976060 to 97976068 8 - TSS region transcription start site region 136193
Tssr136194 15 97976108 to 97976119 11 - TSS region transcription start site region 136194
Tssr136195 15 97976124 to 97976142 18 - TSS region transcription start site region 136195
Tssr136196 15 97976143 to 97976154 11 - TSS region transcription start site region 136196
Tssr136197 15 97976156 to 97976172 16 - TSS region transcription start site region 136197
Tssr136198 15 97976678 to 97976696 18 - TSS region transcription start site region 136198
Tssr136199 15 97976724 to 97976735 11 - TSS region transcription start site region 136199
Tssr136200 15 97976742 to 97976760 18 - TSS region transcription start site region 136200
Tssr136201 15 97976798 to 97976816 18 - TSS region transcription start site region 136201
Tssr136202 15 97976852 to 97976878 26 - TSS region transcription start site region 136202
Tssr4707 15 97976888 to 97976895 7 - TSS region transcription start site region 4707
Tssr136203 15 97977277 to 97977301 24 - TSS region transcription start site region 136203
Tssr136204 15 97977370 to 97977389 19 - TSS region transcription start site region 136204
Tssr136205 15 97977833 to 97977847 14 - TSS region transcription start site region 136205
Tssr136206 15 97977872 to 97977888 16 - TSS region transcription start site region 136206
Tssr136207 15 97977902 to 97977920 18 - TSS region transcription start site region 136207
Tssr4708 15 97979212 to 97979239 27 + TSS region transcription start site region 4708
Tssr132911 15 97984186 to 97984188 2 + TSS region transcription start site region 132911
D15Mit41 15 97987052 to 97987160 108 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 41
Cia37 15 97987052 to 97987160 108 QTL collagen induced arthritis QTL 37
Pgia9 15 97987052 to 97987160 108 QTL proteoglycan induced arthritis 9
D15Mit43 15 97990574 to 97990774 200 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 43
Tssr4709 15 97995601 to 97995603 2 - TSS region transcription start site region 4709
Tssr4710 15 97995624 to 97995635 11 - TSS region transcription start site region 4710
Gm46536 15 97996153 to 97997674 1521 + lncRNA gene predicted gene, 46536
Tssr136208 15 97997590 to 97997597 7 - TSS region transcription start site region 136208
Cpgi7639 15 97999660 to 97999979 319 CpG island CpG island 7639
Cpgi7640 15 98001704 to 98002405 701 CpG island CpG island 7640
Cpgi7641 15 98003149 to 98003334 185 CpG island CpG island 7641
Cpgi7642 15 98003614 to 98003953 339 CpG island CpG island 7642
Cpgi7643 15 98004145 to 98005060 915 CpG island CpG island 7643
Tssr136209 15 98004634 to 98004652 18 - TSS region transcription start site region 136209
Tssr136210 15 98004666 to 98004682 16 - TSS region transcription start site region 136210
Tssr136211 15 98004699 to 98004708 9 - TSS region transcription start site region 136211
Tssr132912 15 98004749 to 98004751 2 + TSS region transcription start site region 132912
Gm41395 15 98029216 to 98036849 7633 - lncRNA gene predicted gene, 41395
Senp1 15 98038744 to 98093744 55000 - protein coding gene SUMO1/sentrin specific peptidase 1
Gm25668 15 98069752 to 98069880 128 + snoRNA gene predicted gene, 25668
Tssr136212 15 98074285 to 98074289 4 - TSS region transcription start site region 136212
Tssr136213 15 98085581 to 98085586 5 - TSS region transcription start site region 136213
Tssr132913 15 98092569 to 98092603 34 + TSS region transcription start site region 132913
Pfkm 15 98092589 to 98132447 39858 + protein coding gene phosphofructokinase, muscle
Cpgi7644 15 98092613 to 98093818 1205 CpG island CpG island 7644
Tssr136214 15 98093088 to 98093137 49 - TSS region transcription start site region 136214
Gm26513 15 98093101 to 98093574 473 + antisense lncRNA gene predicted gene, 26513
Tssr136215 15 98093245 to 98093260 15 - TSS region transcription start site region 136215
Tssr136216 15 98093274 to 98093294 20 - TSS region transcription start site region 136216
Tssr136217 15 98093297 to 98093324 27 - TSS region transcription start site region 136217
Tssr136218 15 98093329 to 98093410 81 - TSS region transcription start site region 136218
Tssr132914 15 98093418 to 98093514 96 + TSS region transcription start site region 132914
Tssr136219 15 98093530 to 98093543 13 - TSS region transcription start site region 136219
Tssr132915 15 98093670 to 98093681 11 + TSS region transcription start site region 132915
Sluc34 15 102988123 to 97987052 -5001071 QTL susceptibility to lung cancer 34