Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:96689932-97110106

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc38a2 15 96687392 to 96699724 12332 - protein coding gene solute carrier family 38, member 2
Tssr136061 15 96689925 to 96689940 15 - TSS region transcription start site region 136061
Tssr136062 15 96691194 to 96691208 14 - TSS region transcription start site region 136062
Cpgi7604 15 96698434 to 96700610 2176 CpG island CpG island 7604
Tssr136063 15 96698699 to 96698706 7 - TSS region transcription start site region 136063
Tssr136064 15 96698749 to 96698764 15 - TSS region transcription start site region 136064
Tssr136065 15 96698776 to 96698792 16 - TSS region transcription start site region 136065
Tssr136066 15 96698796 to 96698808 12 - TSS region transcription start site region 136066
Tssr136067 15 96698809 to 96698855 46 - TSS region transcription start site region 136067
Tssr136068 15 96698910 to 96698914 4 - TSS region transcription start site region 136068
Tssr132844 15 96699033 to 96699044 11 + TSS region transcription start site region 132844
Tssr136069 15 96699121 to 96699137 16 - TSS region transcription start site region 136069
Tssr136070 15 96699678 to 96699684 6 - TSS region transcription start site region 136070
Tssr136071 15 96699698 to 96699717 19 - TSS region transcription start site region 136071
Tssr136072 15 96699731 to 96699734 3 - TSS region transcription start site region 136072
Tssr132845 15 96700084 to 96700093 9 + TSS region transcription start site region 132845
Gm38144 15 96700173 to 96700637 464 + unclassified gene predicted gene, 38144
Tssr136073 15 96702547 to 96702556 9 - TSS region transcription start site region 136073
Cpgi7605 15 96709251 to 96710315 1064 CpG island CpG island 7605
Tssr136074 15 96709627 to 96709643 16 - TSS region transcription start site region 136074
Tssr132846 15 96709889 to 96709933 44 + TSS region transcription start site region 132846
Tssr132847 15 96709956 to 96709971 15 + TSS region transcription start site region 132847
Tssr132848 15 96710016 to 96710028 12 + TSS region transcription start site region 132848
Tssr132849 15 96710371 to 96710376 5 + TSS region transcription start site region 132849
Cpgi7606 15 96736342 to 96736519 177 CpG island CpG island 7606
Tssr136075 15 96747711 to 96747727 16 - TSS region transcription start site region 136075
Gm8888 15 96766766 to 96767078 312 - pseudogene predicted gene 8888
Cpgi7607 15 96766801 to 96767128 327 CpG island CpG island 7607
Cpgi7608 15 96793328 to 96793525 197 CpG island CpG island 7608
Gm32564 15 96818707 to 96833419 14712 + lncRNA gene predicted gene, 32564
Gm32677 15 96838547 to 96843951 5404 + lncRNA gene predicted gene, 32677
Cpgi7609 15 96899932 to 96900106 174 CpG island CpG island 7609
Rpl10a-ps3 15 96922760 to 96923405 645 - pseudogene ribosomal protein L10A, pseudogene 3
Cpgi7610 15 96936636 to 96936897 261 CpG island CpG island 7610
Tssr136076 15 96953517 to 96953528 11 - TSS region transcription start site region 136076
Tssr136077 15 96953536 to 96953550 14 - TSS region transcription start site region 136077
Cpgi7611 15 96953568 to 96954156 588 CpG island CpG island 7611
Slc38a4 15 96994823 to 97055956 61133 - protein coding gene solute carrier family 38, member 4
Tssr136078 15 96996297 to 96996324 27 - TSS region transcription start site region 136078
Tssr136079 15 96996973 to 96996984 11 - TSS region transcription start site region 136079
Tssr136080 15 96997084 to 96997090 6 - TSS region transcription start site region 136080
Tssr136081 15 97008682 to 97008688 6 - TSS region transcription start site region 136081
Tssr136082 15 97008700 to 97008716 16 - TSS region transcription start site region 136082
Tssr136083 15 97008725 to 97008744 19 - TSS region transcription start site region 136083
Tssr136084 15 97008897 to 97008908 11 - TSS region transcription start site region 136084
Tssr136085 15 97008986 to 97009007 21 - TSS region transcription start site region 136085
Tssr136086 15 97010140 to 97010160 20 - TSS region transcription start site region 136086
Tssr136087 15 97010189 to 97010201 12 - TSS region transcription start site region 136087
Imrfq2 15 97011059 to 97011157 98 QTL immune response to Factor IX QTL 2
D15Mit161 15 97011059 to 97011157 98 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 161
D15Mit161.1 15 97011163 to 97011289 126 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 161.1
Tssr136088 15 97013475 to 97013495 20 - TSS region transcription start site region 136088
Tssr136089 15 97013564 to 97013575 11 - TSS region transcription start site region 136089
Tssr136090 15 97013585 to 97013608 23 - TSS region transcription start site region 136090
Tssr136091 15 97013681 to 97013687 6 - TSS region transcription start site region 136091
Tssr136092 15 97019470 to 97019482 12 - TSS region transcription start site region 136092
Tssr136093 15 97019527 to 97019538 11 - TSS region transcription start site region 136093
Tssr136094 15 97019840 to 97019847 7 - TSS region transcription start site region 136094
Tssr136095 15 97019878 to 97019883 5 - TSS region transcription start site region 136095
Tssr136096 15 97019891 to 97019902 11 - TSS region transcription start site region 136096
Tssr136097 15 97019924 to 97019937 13 - TSS region transcription start site region 136097
Tssr136098 15 97019940 to 97019972 32 - TSS region transcription start site region 136098
Tssr136099 15 97020079 to 97020086 7 - TSS region transcription start site region 136099
Tssr136100 15 97020323 to 97020336 13 - TSS region transcription start site region 136100
Tssr136101 15 97020343 to 97020358 15 - TSS region transcription start site region 136101
Tssr136102 15 97029274 to 97029277 3 - TSS region transcription start site region 136102
Tssr136103 15 97031205 to 97031221 16 - TSS region transcription start site region 136103
Gm32840 15 97039238 to 97106904 67666 + lncRNA gene predicted gene, 32840
Tssr132850 15 97044171 to 97044189 18 + TSS region transcription start site region 132850
Tssr136104 15 97050083 to 97050099 16 - TSS region transcription start site region 136104
Cpgi7612 15 97054392 to 97055199 807 CpG island CpG island 7612
Tssr136105 15 97055886 to 97055907 21 - TSS region transcription start site region 136105
Tssr136106 15 97055942 to 97055964 22 - TSS region transcription start site region 136106
Gm32789 15 97067187 to 97069320 2133 + lncRNA gene predicted gene, 32789
Gm32733 15 97102525 to 97107514 4989 - lncRNA gene predicted gene, 32733