MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 15:96405935-96515993

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Scaf11	15	96411699 to 96460843	49144	-	protein coding gene	SR-related CTD-associated factor 11
Tssr4705	15	96457232 to 96457246	14	+	TSS region	transcription start site region 4705
Cpgi7601	15	96459827 to 96461817	1990		CpG island	CpG island 7601
Tssr132828	15	96460208 to 96460225	17	+	TSS region	transcription start site region 132828
Tssr136024	15	96460711 to 96460742	31	-	TSS region	transcription start site region 136024
Tssr136025	15	96460743 to 96460834	91	-	TSS region	transcription start site region 136025
Tssr136026	15	96460838 to 96460856	18	-	TSS region	transcription start site region 136026
Tssr136027	15	96460871 to 96460926	55	-	TSS region	transcription start site region 136027
Tssr136028	15	96460935 to 96460993	58	-	TSS region	transcription start site region 136028
Tssr132829	15	96461437 to 96461454	17	+	TSS region	transcription start site region 132829
Tssr136029	15	96474447 to 96474468	21	-	TSS region	transcription start site region 136029
Tssr136030	15	96474722 to 96474734	12	-	TSS region	transcription start site region 136030
Tssr136031	15	96474736 to 96474755	19	-	TSS region	transcription start site region 136031
Tssr132830	15	96474884 to 96474891	7	+	TSS region	transcription start site region 132830
Cpgi7602	15	96478530 to 96478729	199		CpG island	CpG island 7602
Gm41392	15	96494472 to 96498764	4292	+	lincRNA gene	predicted gene, 41392
Tssr136032	15	96507195 to 96507201	6	-	TSS region	transcription start site region 136032
Gm32406	15	96507296 to 96518387	11091	+	lncRNA gene	predicted gene, 32406