Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:96384472-96608764

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arid2 15 96287518 to 96404992 117474 + protein coding gene AT rich interactive domain 2 (ARID, RFX-like)
Tssr132827 15 96402993 to 96403023 30 + TSS region transcription start site region 132827
Gm25397 15 96404858 to 96404949 91 + miRNA gene predicted gene, 25397
Scaf11 15 96411699 to 96460843 49144 - protein coding gene SR-related CTD-associated factor 11
Tssr4705 15 96457232 to 96457246 14 + TSS region transcription start site region 4705
Cpgi7601 15 96459827 to 96461817 1990 CpG island CpG island 7601
Tssr132828 15 96460208 to 96460225 17 + TSS region transcription start site region 132828
Tssr136024 15 96460711 to 96460742 31 - TSS region transcription start site region 136024
Tssr136025 15 96460743 to 96460834 91 - TSS region transcription start site region 136025
Tssr136026 15 96460838 to 96460856 18 - TSS region transcription start site region 136026
Tssr136027 15 96460871 to 96460926 55 - TSS region transcription start site region 136027
Tssr136028 15 96460935 to 96460993 58 - TSS region transcription start site region 136028
Tssr132829 15 96461437 to 96461454 17 + TSS region transcription start site region 132829
Tssr136029 15 96474447 to 96474468 21 - TSS region transcription start site region 136029
Tssr136030 15 96474722 to 96474734 12 - TSS region transcription start site region 136030
Tssr136031 15 96474736 to 96474755 19 - TSS region transcription start site region 136031
Tssr132830 15 96474884 to 96474891 7 + TSS region transcription start site region 132830
Cpgi7602 15 96478530 to 96478729 199 CpG island CpG island 7602
Gm41392 15 96494472 to 96498764 4292 + lincRNA gene predicted gene, 41392
Tssr136032 15 96507195 to 96507201 6 - TSS region transcription start site region 136032
Gm32406 15 96507296 to 96518387 11091 + lncRNA gene predicted gene, 32406
Slc38a1 15 96571418 to 96642913 71495 - protein coding gene solute carrier family 38, member 1
Tssr136033 15 96576437 to 96576453 16 - TSS region transcription start site region 136033
Gm32457 15 96579969 to 96581764 1795 - lncRNA gene predicted gene, 32457
Tssr136034 15 96597560 to 96597569 9 - TSS region transcription start site region 136034