Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:96089858-96719949

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126 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr136014 15 96131822 to 96131831 9 - TSS region transcription start site region 136014
Gm38469 15 96134823 to 96287396 152573 - protein coding gene predicted gene, 38469
Gm4371 15 96182800 to 96203470 20670 + pseudogene predicted gene 4371
Tssr132813 15 96185734 to 96185772 38 + TSS region transcription start site region 132813
2610037D02Rik 15 96190474 to 96197974 7500 - lincRNA gene RIKEN cDNA 2610037D02 gene
Tssr136015 15 96198009 to 96198028 19 - TSS region transcription start site region 136015
Tssr136016 15 96204681 to 96204692 11 - TSS region transcription start site region 136016
Tssr136017 15 96204705 to 96204714 9 - TSS region transcription start site region 136017
Tssr136018 15 96210864 to 96210876 12 - TSS region transcription start site region 136018
4833422M21Rik 15 96231870 to 96254684 22814 - lncRNA gene RIKEN cDNA 4833422M21 gene
Cpgi7598 15 96236249 to 96236415 166 CpG island CpG island 7598
Gm8866 15 96247322 to 96247919 597 - pseudogene predicted gene 8866
Tssr136019 15 96264050 to 96264053 3 - TSS region transcription start site region 136019
Dipa5 15 96265530 to 96265658 128 QTL drug induced psychomotor activation 5
D15Mit39 15 96265530 to 96265658 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 39
E330033B04Rik 15 96268564 to 96275275 6711 - lncRNA gene RIKEN cDNA E330033B04 gene
Tssr136020 15 96273334 to 96273337 3 - TSS region transcription start site region 136020
Cpgi7599 15 96284748 to 96285883 1135 CpG island CpG island 7599
Tssr136021 15 96285491 to 96285539 48 - TSS region transcription start site region 136021
Tssr136022 15 96285709 to 96285732 23 - TSS region transcription start site region 136022
Tssr136023 15 96285885 to 96285900 15 - TSS region transcription start site region 136023
Tssr132814 15 96286005 to 96286024 19 + TSS region transcription start site region 132814
Cpgi7600 15 96286289 to 96288692 2403 CpG island CpG island 7600
Tssr132815 15 96286756 to 96286767 11 + TSS region transcription start site region 132815
Tssr132816 15 96286789 to 96286844 55 + TSS region transcription start site region 132816
Tssr132817 15 96286860 to 96286919 59 + TSS region transcription start site region 132817
Tssr132818 15 96286930 to 96286939 9 + TSS region transcription start site region 132818
Tssr132819 15 96287248 to 96287265 17 + TSS region transcription start site region 132819
Tssr132820 15 96287270 to 96287280 10 + TSS region transcription start site region 132820
Arid2 15 96287518 to 96404992 117474 + protein coding gene AT rich interactive domain 2 (ARID, RFX-like)
Tssr132821 15 96287537 to 96287604 67 + TSS region transcription start site region 132821
Tssr132822 15 96287766 to 96287769 3 + TSS region transcription start site region 132822
Tssr132823 15 96288882 to 96288893 11 + TSS region transcription start site region 132823
Tssr132824 15 96288905 to 96288916 11 + TSS region transcription start site region 132824
Tssr132825 15 96342570 to 96342574 4 + TSS region transcription start site region 132825
Tssr132826 15 96370252 to 96370263 11 + TSS region transcription start site region 132826
Tssr132827 15 96402993 to 96403023 30 + TSS region transcription start site region 132827
Gm25397 15 96404858 to 96404949 91 + miRNA gene predicted gene, 25397
Scaf11 15 96411699 to 96460843 49144 - protein coding gene SR-related CTD-associated factor 11
Tssr4705 15 96457232 to 96457246 14 + TSS region transcription start site region 4705
Cpgi7601 15 96459827 to 96461817 1990 CpG island CpG island 7601
Tssr132828 15 96460208 to 96460225 17 + TSS region transcription start site region 132828
Tssr136024 15 96460711 to 96460742 31 - TSS region transcription start site region 136024
Tssr136025 15 96460743 to 96460834 91 - TSS region transcription start site region 136025
Tssr136026 15 96460838 to 96460856 18 - TSS region transcription start site region 136026
Tssr136027 15 96460871 to 96460926 55 - TSS region transcription start site region 136027
Tssr136028 15 96460935 to 96460993 58 - TSS region transcription start site region 136028
Tssr132829 15 96461437 to 96461454 17 + TSS region transcription start site region 132829
Tssr136029 15 96474447 to 96474468 21 - TSS region transcription start site region 136029
Tssr136030 15 96474722 to 96474734 12 - TSS region transcription start site region 136030
Tssr136031 15 96474736 to 96474755 19 - TSS region transcription start site region 136031
Tssr132830 15 96474884 to 96474891 7 + TSS region transcription start site region 132830
Cpgi7602 15 96478530 to 96478729 199 CpG island CpG island 7602
Gm41392 15 96494472 to 96498764 4292 + lincRNA gene predicted gene, 41392
Tssr136032 15 96507195 to 96507201 6 - TSS region transcription start site region 136032
Gm32406 15 96507296 to 96518387 11091 + lncRNA gene predicted gene, 32406
Slc38a1 15 96571418 to 96642913 71495 - protein coding gene solute carrier family 38, member 1
Tssr136033 15 96576437 to 96576453 16 - TSS region transcription start site region 136033
Gm32457 15 96579969 to 96581764 1795 - lncRNA gene predicted gene, 32457
Tssr136034 15 96597560 to 96597569 9 - TSS region transcription start site region 136034
Tssr136035 15 96615411 to 96615424 13 - TSS region transcription start site region 136035
Tssr136036 15 96638185 to 96638199 14 - TSS region transcription start site region 136036
Tssr136037 15 96638206 to 96638222 16 - TSS region transcription start site region 136037
Tssr132831 15 96638490 to 96638512 22 + TSS region transcription start site region 132831
Tssr132832 15 96638575 to 96638582 7 + TSS region transcription start site region 132832
Tssr132833 15 96638671 to 96638675 4 + TSS region transcription start site region 132833
Tssr136038 15 96639727 to 96639744 17 - TSS region transcription start site region 136038
Tssr136039 15 96640120 to 96640124 4 - TSS region transcription start site region 136039
Tssr136040 15 96640619 to 96640623 4 - TSS region transcription start site region 136040
Tssr136041 15 96640789 to 96640825 36 - TSS region transcription start site region 136041
Cpgi7603 15 96641020 to 96643454 2434 CpG island CpG island 7603
Tssr132834 15 96641055 to 96641070 15 + TSS region transcription start site region 132834
Tssr136042 15 96641160 to 96641252 92 - TSS region transcription start site region 136042
Tssr132835 15 96641308 to 96641328 20 + TSS region transcription start site region 132835
Tssr136043 15 96641459 to 96641474 15 - TSS region transcription start site region 136043
Tssr136044 15 96641482 to 96641556 74 - TSS region transcription start site region 136044
Tssr136045 15 96641564 to 96641575 11 - TSS region transcription start site region 136045
Tssr136046 15 96641619 to 96641631 12 - TSS region transcription start site region 136046
Tssr132836 15 96641629 to 96641640 11 + TSS region transcription start site region 132836
Tssr132837 15 96641667 to 96641747 80 + TSS region transcription start site region 132837
Tssr136047 15 96642186 to 96642197 11 - TSS region transcription start site region 136047
Tssr136048 15 96642203 to 96642234 31 - TSS region transcription start site region 136048
Tssr136049 15 96642236 to 96642271 35 - TSS region transcription start site region 136049
Tssr136050 15 96642281 to 96642310 29 - TSS region transcription start site region 136050
Tssr136051 15 96642311 to 96642347 36 - TSS region transcription start site region 136051
Tssr132838 15 96642459 to 96642497 38 + TSS region transcription start site region 132838
Tssr132839 15 96642509 to 96642525 16 + TSS region transcription start site region 132839
Tssr132840 15 96642561 to 96642571 10 + TSS region transcription start site region 132840
Tssr132841 15 96642588 to 96642599 11 + TSS region transcription start site region 132841
Tssr136052 15 96642619 to 96642672 53 - TSS region transcription start site region 136052
Tssr136053 15 96642757 to 96642778 21 - TSS region transcription start site region 136053
Tssr136054 15 96642800 to 96642819 19 - TSS region transcription start site region 136054
Tssr136055 15 96642852 to 96642875 23 - TSS region transcription start site region 136055
Tssr136056 15 96642883 to 96642984 101 - TSS region transcription start site region 136056
Tssr136057 15 96643124 to 96643137 13 - TSS region transcription start site region 136057
Tssr132842 15 96643225 to 96643272 47 + TSS region transcription start site region 132842
Tssr136058 15 96643264 to 96643293 29 - TSS region transcription start site region 136058
Gm46503 15 96648835 to 96649408 573 - pseudogene predicted gene, 46503
Tssr132843 15 96654949 to 96655014 65 + TSS region transcription start site region 132843
Tssr136059 15 96655532 to 96655534 2 - TSS region transcription start site region 136059
Gm22045 15 96671793 to 96671900 107 + snRNA gene predicted gene, 22045
Slc38a2 15 96687392 to 96699724 12332 - protein coding gene solute carrier family 38, member 2
Tssr136060 15 96688324 to 96688343 19 - TSS region transcription start site region 136060
Tssr136061 15 96689925 to 96689940 15 - TSS region transcription start site region 136061
Tssr136062 15 96691194 to 96691208 14 - TSS region transcription start site region 136062
Cpgi7604 15 96698434 to 96700610 2176 CpG island CpG island 7604
Tssr136063 15 96698699 to 96698706 7 - TSS region transcription start site region 136063
Tssr136064 15 96698749 to 96698764 15 - TSS region transcription start site region 136064
Tssr136065 15 96698776 to 96698792 16 - TSS region transcription start site region 136065
Tssr136066 15 96698796 to 96698808 12 - TSS region transcription start site region 136066
Tssr136067 15 96698809 to 96698855 46 - TSS region transcription start site region 136067
Tssr136068 15 96698910 to 96698914 4 - TSS region transcription start site region 136068
Tssr132844 15 96699033 to 96699044 11 + TSS region transcription start site region 132844
Tssr136069 15 96699121 to 96699137 16 - TSS region transcription start site region 136069
Tssr136070 15 96699678 to 96699684 6 - TSS region transcription start site region 136070
Tssr136071 15 96699698 to 96699717 19 - TSS region transcription start site region 136071
Tssr136072 15 96699731 to 96699734 3 - TSS region transcription start site region 136072
Tssr132845 15 96700084 to 96700093 9 + TSS region transcription start site region 132845
Gm38144 15 96700173 to 96700637 464 + unclassified gene predicted gene, 38144
Tssr136073 15 96702547 to 96702556 9 - TSS region transcription start site region 136073
Cpgi7605 15 96709251 to 96710315 1064 CpG island CpG island 7605
Tssr136074 15 96709627 to 96709643 16 - TSS region transcription start site region 136074
Tssr132846 15 96709889 to 96709933 44 + TSS region transcription start site region 132846
Tssr132847 15 96709956 to 96709971 15 + TSS region transcription start site region 132847
Tssr132848 15 96710016 to 96710028 12 + TSS region transcription start site region 132848
Tssr132849 15 96710371 to 96710376 5 + TSS region transcription start site region 132849