Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:95962800-96423470

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ano6 15 95790843 to 95974751 183908 + protein coding gene anoctamin 6
Tssr132811 15 95965893 to 95965906 13 + TSS region transcription start site region 132811
Gm49172 15 95972739 to 95994129 21390 - unclassified non-coding RNA gene predicted gene, 49172
V125Dq11 15 96000000 to 96000000 0 QTL vitamin D active form serum level QTL 11
D15Mit75 15 96043497 to 96043618 121 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 75
D030018L15Rik 15 96051616 to 96079553 27937 - lincRNA gene RIKEN cDNA D030018L15 gene
Tssr132812 15 96063212 to 96063218 6 + TSS region transcription start site region 132812
Gm41390 15 96072956 to 96076105 3149 + pseudogene predicted gene, 41390
Tssr136014 15 96131822 to 96131831 9 - TSS region transcription start site region 136014
Gm38469 15 96134823 to 96287396 152573 - protein coding gene predicted gene, 38469
Gm4371 15 96182800 to 96203470 20670 + pseudogene predicted gene 4371
Tssr132813 15 96185734 to 96185772 38 + TSS region transcription start site region 132813
2610037D02Rik 15 96190474 to 96197974 7500 - lincRNA gene RIKEN cDNA 2610037D02 gene
Tssr136015 15 96198009 to 96198028 19 - TSS region transcription start site region 136015
Tssr136016 15 96204681 to 96204692 11 - TSS region transcription start site region 136016
Tssr136017 15 96204705 to 96204714 9 - TSS region transcription start site region 136017
Tssr136018 15 96210864 to 96210876 12 - TSS region transcription start site region 136018
4833422M21Rik 15 96231870 to 96254684 22814 - lncRNA gene RIKEN cDNA 4833422M21 gene
Cpgi7598 15 96236249 to 96236415 166 CpG island CpG island 7598
Gm8866 15 96247322 to 96247919 597 - pseudogene predicted gene 8866
Tssr136019 15 96264050 to 96264053 3 - TSS region transcription start site region 136019
Dipa5 15 96265530 to 96265658 128 QTL drug induced psychomotor activation 5
D15Mit39 15 96265530 to 96265658 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 39
E330033B04Rik 15 96268564 to 96275275 6711 - lncRNA gene RIKEN cDNA E330033B04 gene
Tssr136020 15 96273334 to 96273337 3 - TSS region transcription start site region 136020
Cpgi7599 15 96284748 to 96285883 1135 CpG island CpG island 7599
Tssr136021 15 96285491 to 96285539 48 - TSS region transcription start site region 136021
Tssr136022 15 96285709 to 96285732 23 - TSS region transcription start site region 136022
Tssr136023 15 96285885 to 96285900 15 - TSS region transcription start site region 136023
Tssr132814 15 96286005 to 96286024 19 + TSS region transcription start site region 132814
Cpgi7600 15 96286289 to 96288692 2403 CpG island CpG island 7600
Tssr132815 15 96286756 to 96286767 11 + TSS region transcription start site region 132815
Tssr132816 15 96286789 to 96286844 55 + TSS region transcription start site region 132816
Tssr132817 15 96286860 to 96286919 59 + TSS region transcription start site region 132817
Tssr132818 15 96286930 to 96286939 9 + TSS region transcription start site region 132818
Tssr132819 15 96287248 to 96287265 17 + TSS region transcription start site region 132819
Tssr132820 15 96287270 to 96287280 10 + TSS region transcription start site region 132820
Arid2 15 96287518 to 96404992 117474 + protein coding gene AT rich interactive domain 2 (ARID, RFX-like)
Tssr132821 15 96287537 to 96287604 67 + TSS region transcription start site region 132821
Tssr132822 15 96287766 to 96287769 3 + TSS region transcription start site region 132822
Tssr132823 15 96288882 to 96288893 11 + TSS region transcription start site region 132823
Tssr132824 15 96288905 to 96288916 11 + TSS region transcription start site region 132824
Tssr132825 15 96342570 to 96342574 4 + TSS region transcription start site region 132825
Tssr132826 15 96370252 to 96370263 11 + TSS region transcription start site region 132826
Tssr132827 15 96402993 to 96403023 30 + TSS region transcription start site region 132827
Gm25397 15 96404858 to 96404949 91 + miRNA gene predicted gene, 25397
Scaf11 15 96411699 to 96460843 49144 - protein coding gene SR-related CTD-associated factor 11