Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:95876870-96609684

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ano6 15 95790843 to 95974751 183908 + protein coding gene anoctamin 6
Gm25070 15 95879716 to 95879817 101 - miRNA gene predicted gene, 25070
Tssr136013 15 95887504 to 95887537 33 - TSS region transcription start site region 136013
Gm41389 15 95897656 to 95907629 9973 - lncRNA gene predicted gene, 41389
Tssr132808 15 95943558 to 95943561 3 + TSS region transcription start site region 132808
Cpgi7597 15 95948160 to 95948766 606 CpG island CpG island 7597
3110045A19Rik 15 95951036 to 95952369 1333 unclassified gene RIKEN cDNA 3110045A19 gene
Tssr132809 15 95959153 to 95959161 8 + TSS region transcription start site region 132809
Tssr132810 15 95959183 to 95959193 10 + TSS region transcription start site region 132810
Tssr132811 15 95965893 to 95965906 13 + TSS region transcription start site region 132811
Gm49172 15 95972739 to 95994129 21390 - unclassified non-coding RNA gene predicted gene, 49172
V125Dq11 15 96000000 to 96000000 0 QTL vitamin D active form serum level QTL 11
D15Mit75 15 96043497 to 96043618 121 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 75
D030018L15Rik 15 96051616 to 96079553 27937 - lincRNA gene RIKEN cDNA D030018L15 gene
Tssr132812 15 96063212 to 96063218 6 + TSS region transcription start site region 132812
Gm41390 15 96072956 to 96076105 3149 + pseudogene predicted gene, 41390
Tssr136014 15 96131822 to 96131831 9 - TSS region transcription start site region 136014
Gm38469 15 96134823 to 96287396 152573 - protein coding gene predicted gene, 38469
Gm4371 15 96182800 to 96203470 20670 + pseudogene predicted gene 4371
Tssr132813 15 96185734 to 96185772 38 + TSS region transcription start site region 132813
2610037D02Rik 15 96190474 to 96197974 7500 - lincRNA gene RIKEN cDNA 2610037D02 gene
Tssr136015 15 96198009 to 96198028 19 - TSS region transcription start site region 136015
Tssr136016 15 96204681 to 96204692 11 - TSS region transcription start site region 136016
Tssr136017 15 96204705 to 96204714 9 - TSS region transcription start site region 136017
Tssr136018 15 96210864 to 96210876 12 - TSS region transcription start site region 136018
4833422M21Rik 15 96231870 to 96254684 22814 - lncRNA gene RIKEN cDNA 4833422M21 gene
Cpgi7598 15 96236249 to 96236415 166 CpG island CpG island 7598
Gm8866 15 96247322 to 96247919 597 - pseudogene predicted gene 8866
Tssr136019 15 96264050 to 96264053 3 - TSS region transcription start site region 136019
Dipa5 15 96265530 to 96265658 128 QTL drug induced psychomotor activation 5
D15Mit39 15 96265530 to 96265658 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 39
E330033B04Rik 15 96268564 to 96275275 6711 - lncRNA gene RIKEN cDNA E330033B04 gene
Tssr136020 15 96273334 to 96273337 3 - TSS region transcription start site region 136020
Cpgi7599 15 96284748 to 96285883 1135 CpG island CpG island 7599
Tssr136021 15 96285491 to 96285539 48 - TSS region transcription start site region 136021
Tssr136022 15 96285709 to 96285732 23 - TSS region transcription start site region 136022
Tssr136023 15 96285885 to 96285900 15 - TSS region transcription start site region 136023
Tssr132814 15 96286005 to 96286024 19 + TSS region transcription start site region 132814
Cpgi7600 15 96286289 to 96288692 2403 CpG island CpG island 7600
Tssr132815 15 96286756 to 96286767 11 + TSS region transcription start site region 132815
Tssr132816 15 96286789 to 96286844 55 + TSS region transcription start site region 132816
Tssr132817 15 96286860 to 96286919 59 + TSS region transcription start site region 132817
Tssr132818 15 96286930 to 96286939 9 + TSS region transcription start site region 132818
Tssr132819 15 96287248 to 96287265 17 + TSS region transcription start site region 132819
Tssr132820 15 96287270 to 96287280 10 + TSS region transcription start site region 132820
Arid2 15 96287518 to 96404992 117474 + protein coding gene AT rich interactive domain 2 (ARID, RFX-like)
Tssr132821 15 96287537 to 96287604 67 + TSS region transcription start site region 132821
Tssr132822 15 96287766 to 96287769 3 + TSS region transcription start site region 132822
Tssr132823 15 96288882 to 96288893 11 + TSS region transcription start site region 132823
Tssr132824 15 96288905 to 96288916 11 + TSS region transcription start site region 132824
Tssr132825 15 96342570 to 96342574 4 + TSS region transcription start site region 132825
Tssr132826 15 96370252 to 96370263 11 + TSS region transcription start site region 132826
Tssr132827 15 96402993 to 96403023 30 + TSS region transcription start site region 132827
Gm25397 15 96404858 to 96404949 91 + miRNA gene predicted gene, 25397
Scaf11 15 96411699 to 96460843 49144 - protein coding gene SR-related CTD-associated factor 11
Tssr4705 15 96457232 to 96457246 14 + TSS region transcription start site region 4705
Cpgi7601 15 96459827 to 96461817 1990 CpG island CpG island 7601
Tssr132828 15 96460208 to 96460225 17 + TSS region transcription start site region 132828
Tssr136024 15 96460711 to 96460742 31 - TSS region transcription start site region 136024
Tssr136025 15 96460743 to 96460834 91 - TSS region transcription start site region 136025
Tssr136026 15 96460838 to 96460856 18 - TSS region transcription start site region 136026
Tssr136027 15 96460871 to 96460926 55 - TSS region transcription start site region 136027
Tssr136028 15 96460935 to 96460993 58 - TSS region transcription start site region 136028
Tssr132829 15 96461437 to 96461454 17 + TSS region transcription start site region 132829
Tssr136029 15 96474447 to 96474468 21 - TSS region transcription start site region 136029
Tssr136030 15 96474722 to 96474734 12 - TSS region transcription start site region 136030
Tssr136031 15 96474736 to 96474755 19 - TSS region transcription start site region 136031
Tssr132830 15 96474884 to 96474891 7 + TSS region transcription start site region 132830
Cpgi7602 15 96478530 to 96478729 199 CpG island CpG island 7602
Gm41392 15 96494472 to 96498764 4292 + lincRNA gene predicted gene, 41392
Tssr136032 15 96507195 to 96507201 6 - TSS region transcription start site region 136032
Gm32406 15 96507296 to 96518387 11091 + lncRNA gene predicted gene, 32406
Slc38a1 15 96571418 to 96642913 71495 - protein coding gene solute carrier family 38, member 1
Tssr136033 15 96576437 to 96576453 16 - TSS region transcription start site region 136033
Gm32457 15 96579969 to 96581764 1795 - lncRNA gene predicted gene, 32457
Tssr136034 15 96597560 to 96597569 9 - TSS region transcription start site region 136034