Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:94554176-95226366

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Irak4 15 94543613 to 94568317 24704 + protein coding gene interleukin-1 receptor-associated kinase 4
Cpgi7590 15 94561490 to 94561725 235 CpG island CpG island 7590
Tssr132783 15 94561583 to 94561597 14 + TSS region transcription start site region 132783
Tssr135988 15 94566026 to 94566035 9 - TSS region transcription start site region 135988
Tssr132784 15 94567074 to 94567080 6 + TSS region transcription start site region 132784
Twf1 15 94577948 to 94589884 11936 - protein coding gene twinfilin actin binding protein 1
Tssr135989 15 94579208 to 94579230 22 - TSS region transcription start site region 135989
Tssr135990 15 94586510 to 94586531 21 - TSS region transcription start site region 135990
Tssr135991 15 94588055 to 94588060 5 - TSS region transcription start site region 135991
Tssr135992 15 94588084 to 94588087 3 - TSS region transcription start site region 135992
Cpgi7591 15 94589267 to 94590019 752 CpG island CpG island 7591
Tssr135993 15 94589807 to 94589828 21 - TSS region transcription start site region 135993
Tssr135994 15 94589832 to 94589864 32 - TSS region transcription start site region 135994
Tssr135995 15 94589870 to 94589881 11 - TSS region transcription start site region 135995
Gm30754 15 94595525 to 94599490 3965 - lncRNA gene predicted gene, 30754
Cpgi7592 15 94628802 to 94629751 949 CpG island CpG island 7592
Tssr132785 15 94628906 to 94628922 16 + TSS region transcription start site region 132785
Tssr132786 15 94629082 to 94629129 47 + TSS region transcription start site region 132786
Tssr132787 15 94629148 to 94629159 11 + TSS region transcription start site region 132787
Tmem117 15 94629232 to 95096098 466866 + protein coding gene transmembrane protein 117
Tssr132788 15 94629236 to 94629270 34 + TSS region transcription start site region 132788
Heal4 15 94629711 to 94629826 115 QTL wound healing/regeneration 4
D15Mit244 15 94629711 to 94629826 115 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 244
Gm25546 15 94681255 to 94681386 131 - snoRNA gene predicted gene, 25546
Tssr4700 15 94715346 to 94715350 4 + TSS region transcription start site region 4700
Gm31007 15 94889176 to 94891366 2190 - lncRNA gene predicted gene, 31007
Cal5 15 94974879 to 99363692 4388813 heritable phenotypic marker caracul like 5
D15Mit76 15 94974879 to 94975141 262 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 76
Gm23129 15 94987007 to 94987138 131 - snoRNA gene predicted gene, 23129
Tssr132789 15 94996882 to 94996887 5 + TSS region transcription start site region 132789
Gm30953 15 95016055 to 95043012 26957 - lncRNA gene predicted gene, 30953
Gm30810 15 95065985 to 95077331 11346 - lncRNA gene predicted gene, 30810
Tssr132790 15 95095400 to 95095405 5 + TSS region transcription start site region 132790
1700129L04Rik 15 95097622 to 95149318 51696 - sense intronic lncRNA gene RIKEN cDNA 1700129L04 gene
Lfibq27 15 95169142 to 95472472 303330 QTL liver fibrosis QTL 27
Gm31075 15 95176699 to 95203767 27068 - lncRNA gene predicted gene, 31075
Tssr4701 15 95185029 to 95185040 11 - TSS region transcription start site region 4701
Nell2 15 95219440 to 95528759 309319 - protein coding gene NEL-like 2
Cal6 15 102988123 to 94974879 -8013244 heritable phenotypic marker caracul-like 6