Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:94289879-95660141

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
cmy2 15 81245519 to 95314546 14069027 heritable phenotypic marker cardiomyopathy 2
Adamts20 15 94268314 to 94432074 163760 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
Cpgi7586 15 94349106 to 94349296 190 CpG island CpG island 7586
Cpgi7587 15 94403174 to 94404925 1751 CpG island CpG island 7587
Tssr135985 15 94404288 to 94404327 39 - TSS region transcription start site region 135985
Tssr135986 15 94404339 to 94404371 32 - TSS region transcription start site region 135986
D15Mit272 15 94409002 to 94409125 123 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 272
Pus7l 15 94522688 to 94543547 20859 - protein coding gene pseudouridylate synthase 7-like
Cpgi7588 15 94522891 to 94523621 730 CpG island CpG island 7588
Cpgi7589 15 94543205 to 94544110 905 CpG island CpG island 7589
Tssr135987 15 94543472 to 94543514 42 - TSS region transcription start site region 135987
Tssr132780 15 94543605 to 94543658 53 + TSS region transcription start site region 132780
Irak4 15 94543613 to 94568317 24704 + protein coding gene interleukin-1 receptor-associated kinase 4
Tssr132781 15 94543666 to 94543681 15 + TSS region transcription start site region 132781
Tssr132782 15 94544260 to 94544268 8 + TSS region transcription start site region 132782
Cpgi7590 15 94561490 to 94561725 235 CpG island CpG island 7590
Tssr132783 15 94561583 to 94561597 14 + TSS region transcription start site region 132783
Tssr135988 15 94566026 to 94566035 9 - TSS region transcription start site region 135988
Tssr132784 15 94567074 to 94567080 6 + TSS region transcription start site region 132784
Twf1 15 94577948 to 94589884 11936 - protein coding gene twinfilin actin binding protein 1
Tssr135989 15 94579208 to 94579230 22 - TSS region transcription start site region 135989
Tssr135990 15 94586510 to 94586531 21 - TSS region transcription start site region 135990
Tssr135991 15 94588055 to 94588060 5 - TSS region transcription start site region 135991
Tssr135992 15 94588084 to 94588087 3 - TSS region transcription start site region 135992
Cpgi7591 15 94589267 to 94590019 752 CpG island CpG island 7591
Tssr135993 15 94589807 to 94589828 21 - TSS region transcription start site region 135993
Tssr135994 15 94589832 to 94589864 32 - TSS region transcription start site region 135994
Tssr135995 15 94589870 to 94589881 11 - TSS region transcription start site region 135995
Gm30754 15 94595525 to 94599490 3965 - lncRNA gene predicted gene, 30754
Cpgi7592 15 94628802 to 94629751 949 CpG island CpG island 7592
Tssr132785 15 94628906 to 94628922 16 + TSS region transcription start site region 132785
Tssr132786 15 94629082 to 94629129 47 + TSS region transcription start site region 132786
Tssr132787 15 94629148 to 94629159 11 + TSS region transcription start site region 132787
Tmem117 15 94629232 to 95096098 466866 + protein coding gene transmembrane protein 117
Tssr132788 15 94629236 to 94629270 34 + TSS region transcription start site region 132788
Heal4 15 94629711 to 94629826 115 QTL wound healing/regeneration 4
D15Mit244 15 94629711 to 94629826 115 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 244
Gm25546 15 94681255 to 94681386 131 - snoRNA gene predicted gene, 25546
Tssr4700 15 94715346 to 94715350 4 + TSS region transcription start site region 4700
Gm31007 15 94889176 to 94891366 2190 - lncRNA gene predicted gene, 31007
Cal5 15 94974879 to 99363692 4388813 heritable phenotypic marker caracul like 5
D15Mit76 15 94974879 to 94975141 262 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 76
Gm23129 15 94987007 to 94987138 131 - snoRNA gene predicted gene, 23129
Tssr132789 15 94996882 to 94996887 5 + TSS region transcription start site region 132789
Gm30953 15 95016055 to 95043012 26957 - lncRNA gene predicted gene, 30953
Gm30810 15 95065985 to 95077331 11346 - lncRNA gene predicted gene, 30810
Tssr132790 15 95095400 to 95095405 5 + TSS region transcription start site region 132790
1700129L04Rik 15 95097622 to 95149318 51696 - sense intronic lncRNA gene RIKEN cDNA 1700129L04 gene
Lfibq27 15 95169142 to 95472472 303330 QTL liver fibrosis QTL 27
Gm31075 15 95176699 to 95203767 27068 - lncRNA gene predicted gene, 31075
Tssr4701 15 95185029 to 95185040 11 - TSS region transcription start site region 4701
Nell2 15 95219440 to 95528759 309319 - protein coding gene NEL-like 2
Cpgi7593 15 95228792 to 95229307 515 CpG island CpG island 7593
Gm31370 15 95465402 to 95468447 3045 - lncRNA gene predicted gene, 31370
Cpgi7594 15 95527045 to 95528895 1850 CpG island CpG island 7594
Tssr135996 15 95527959 to 95527973 14 - TSS region transcription start site region 135996
Tssr135997 15 95527978 to 95528014 36 - TSS region transcription start site region 135997
Tssr135998 15 95528078 to 95528123 45 - TSS region transcription start site region 135998
Tssr135999 15 95528124 to 95528192 68 - TSS region transcription start site region 135999
Tssr136000 15 95528228 to 95528266 38 - TSS region transcription start site region 136000
Tssr136001 15 95528429 to 95528445 16 - TSS region transcription start site region 136001
Tssr136002 15 95528542 to 95528565 23 - TSS region transcription start site region 136002
Tssr136003 15 95528577 to 95528640 63 - TSS region transcription start site region 136003
Tssr136004 15 95528702 to 95528777 75 - TSS region transcription start site region 136004
Tssr136005 15 95587051 to 95587084 33 - TSS region transcription start site region 136005
Gm31551 15 95595509 to 95599374 3865 - lncRNA gene predicted gene, 31551
Gm24668 15 95606562 to 95606665 103 - snRNA gene predicted gene, 24668
Dbx2 15 95623563 to 95654771 31208 - protein coding gene developing brain homeobox 2
D15Jpk2 15 95625414 to 95625618 204 DNA segment DNA segment, Chr 15, Japan, Kominami 2
Cpgi7595 15 95654022 to 95654899 877 CpG island CpG island 7595
Tssr4702 15 95654348 to 95654371 23 - TSS region transcription start site region 4702
Tssr132791 15 95654470 to 95654481 11 + TSS region transcription start site region 132791
Gm31690 15 95654568 to 95669237 14669 + lncRNA gene predicted gene, 31690
Tssr136006 15 95654680 to 95654689 9 - TSS region transcription start site region 136006
Tssr136007 15 95654692 to 95654713 21 - TSS region transcription start site region 136007
Tssr136008 15 95654779 to 95654794 15 - TSS region transcription start site region 136008
Tssr136009 15 95654809 to 95654826 17 - TSS region transcription start site region 136009
Cal6 15 102988123 to 94974879 -8013244 heritable phenotypic marker caracul-like 6