Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:93395038-94276738

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zcrb1 15 93386106 to 93398301 12195 - protein coding gene zinc finger CCHC-type and RNA binding motif 1
Cpgi7581 15 93397857 to 93398898 1041 CpG island CpG island 7581
Tssr132763 15 93397982 to 93397993 11 + TSS region transcription start site region 132763
Tssr132764 15 93397998 to 93398012 14 + TSS region transcription start site region 132764
Tssr135972 15 93398192 to 93398201 9 - TSS region transcription start site region 135972
Tssr135973 15 93398263 to 93398343 80 - TSS region transcription start site region 135973
Tssr132765 15 93398344 to 93398423 79 + TSS region transcription start site region 132765
Tssr135974 15 93398345 to 93398352 7 - TSS region transcription start site region 135974
Pphln1 15 93398350 to 93491510 93160 + protein coding gene periphilin 1
Tssr132766 15 93398427 to 93398438 11 + TSS region transcription start site region 132766
Tssr135975 15 93398619 to 93398630 11 - TSS region transcription start site region 135975
Gm30181 15 93412664 to 93413556 892 + pseudogene predicted gene, 30181
Tssr132767 15 93412795 to 93412812 17 + TSS region transcription start site region 132767
Tssr132768 15 93432898 to 93432906 8 + TSS region transcription start site region 132768
Tssr132769 15 93432917 to 93432931 14 + TSS region transcription start site region 132769
Tssr132770 15 93432938 to 93432947 9 + TSS region transcription start site region 132770
Tssr132771 15 93435917 to 93435935 18 + TSS region transcription start site region 132771
Tssr132772 15 93435943 to 93435954 11 + TSS region transcription start site region 132772
Tssr132773 15 93435968 to 93435974 6 + TSS region transcription start site region 132773
Tssr132774 15 93441605 to 93441622 17 + TSS region transcription start site region 132774
Tssr132775 15 93453573 to 93453589 16 + TSS region transcription start site region 132775
Tssr132776 15 93473483 to 93473487 4 + TSS region transcription start site region 132776
Prickle1 15 93499114 to 93595891 96777 - protein coding gene prickle planar cell polarity protein 1
Cpgi7582 15 93503195 to 93503806 611 CpG island CpG island 7582
Cpgi7583 15 93518705 to 93519763 1058 CpG island CpG island 7583
Tssr135976 15 93519470 to 93519483 13 - TSS region transcription start site region 135976
Tssr135977 15 93519499 to 93519526 27 - TSS region transcription start site region 135977
Tssr135978 15 93519552 to 93519564 12 - TSS region transcription start site region 135978
Tssr135979 15 93520201 to 93520217 16 - TSS region transcription start site region 135979
Tssr135980 15 93575169 to 93575201 32 - TSS region transcription start site region 135980
Cpgi7584 15 93594994 to 93596685 1691 CpG island CpG island 7584
Tssr135981 15 93595877 to 93595909 32 - TSS region transcription start site region 135981
Cpgi7585 15 93610277 to 93610537 260 CpG island CpG island 7585
Gm41385 15 93611712 to 93630090 18378 + lncRNA gene predicted gene, 41385
Tssr4698 15 93611779 to 93611785 6 + TSS region transcription start site region 4698
D15Mit108 15 93631166 to 93631303 137 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 108
Gm41387 15 93660175 to 93698646 38471 + lncRNA gene predicted gene, 41387
Zfp42-ps1 15 93679160 to 93679649 489 - pseudogene zinc finger protein 48, pseudogene 1
Tssr135982 15 93679950 to 93679961 11 - TSS region transcription start site region 135982
Gm41386 15 93705313 to 93712769 7456 - lincRNA gene predicted gene, 41386
Tssr135983 15 93712731 to 93712750 19 - TSS region transcription start site region 135983
Gm30339 15 93734413 to 93738490 4077 + lincRNA gene predicted gene, 30339
Tssr132777 15 93804671 to 93804675 4 + TSS region transcription start site region 132777
Gm49445 15 93825038 to 93846738 21700 + lincRNA gene predicted gene, 49445
9430014N10Rik 15 93904856 to 93927111 22255 - lincRNA gene RIKEN cDNA 9430014N10 gene
Tssr135984 15 93927043 to 93927053 10 - TSS region transcription start site region 135984
Gm30564 15 93956722 to 93964708 7986 - lincRNA gene predicted gene, 30564
Gm30609 15 93963066 to 93965619 2553 + lncRNA gene predicted gene, 30609
Tssr132778 15 93996198 to 93996202 4 + TSS region transcription start site region 132778
Gm30665 15 94081266 to 94108083 26817 - lncRNA gene predicted gene, 30665
Gm41388 15 94132239 to 94138271 6032 - lncRNA gene predicted gene, 41388
Tssr4699 15 94137758 to 94137793 35 - TSS region transcription start site region 4699
Tssr132779 15 94205319 to 94205326 7 + TSS region transcription start site region 132779
D630010B17Rik 15 94247202 to 94255606 8404 + lncRNA gene RIKEN cDNA D630010B17 gene
Adamts20 15 94268314 to 94432074 163760 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20