Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:92480759-93300895

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdzrn4 15 92396881 to 92771819 374938 + protein coding gene PDZ domain containing RING finger 4
Tssr132757 15 92486670 to 92486702 32 + TSS region transcription start site region 132757
Cpgi7572 15 92510337 to 92510541 204 CpG island CpG island 7572
AW742948 15 92520479 to 92523958 3479 unclassified gene expressed sequence AW742948
Tssr132758 15 92597104 to 92597121 17 + TSS region transcription start site region 132758
Cpgi7573 15 92597120 to 92597474 354 CpG island CpG island 7573
Tssr132759 15 92597129 to 92597167 38 + TSS region transcription start site region 132759
Tssr132760 15 92701425 to 92701438 13 + TSS region transcription start site region 132760
4930588J15Rik 15 92702886 to 92705955 3069 - antisense lncRNA gene RIKEN cDNA 4930588J15 gene
Tssr135959 15 92705953 to 92705970 17 - TSS region transcription start site region 135959
Cpgi7574 15 92752516 to 92752814 298 CpG island CpG island 7574
Cpgi7575 15 92769557 to 92770161 604 CpG island CpG island 7575
Cpgi7576 15 92770654 to 92770871 217 CpG island CpG island 7576
D15Mit147.2 15 92890608 to 92890799 191 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 147.2
D15Mit192 15 92890738 to 92890913 175 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 192
D15Mit147 15 92890759 to 92890895 136 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 147
D15Mit223 15 92907514 to 92907838 324 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 223
D15Mit223.2 15 92907600 to 92907756 156 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 223.2
D15Mit223.1 15 92907821 to 92907932 111 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 223.1
Gm49418 15 92933889 to 92950171 16282 + lincRNA gene predicted gene, 49418
Gm18815 15 92968815 to 92970297 1482 + pseudogene predicted gene, 18815
Gm30085 15 93001824 to 93007017 5193 + lincRNA gene predicted gene, 30085
Tssr132761 15 93002204 to 93002218 14 + TSS region transcription start site region 132761
D15Mit243 15 93013354 to 93013478 124 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 243
Tssr135960 15 93085412 to 93085419 7 - TSS region transcription start site region 135960
Gm18685 15 93089230 to 93089922 692 + pseudogene predicted gene, 18685
Cpgi7577 15 93115707 to 93115945 238 CpG island CpG island 7577
D15Mit217 15 93123962 to 93124059 97 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 217
Gm49420 15 93134911 to 93137594 2683 - unclassified non-coding RNA gene predicted gene, 49420
Gm38535 15 93165229 to 93204866 39637 - lncRNA gene predicted gene, 38535
Gm4335 15 93196595 to 93197598 1003 + pseudogene predicted gene 4335
Tssr135961 15 93232023 to 93232024 1 - TSS region transcription start site region 135961
Gm24447 15 93234363 to 93234700 337 + unclassified non-coding RNA gene predicted gene, 24447
Gxylt1 15 93239742 to 93275179 35437 - protein coding gene glucoside xylosyltransferase 1
Cpgi7578 15 93266372 to 93266625 253 CpG island CpG island 7578
Tssr135962 15 93270601 to 93270608 7 - TSS region transcription start site region 135962
Cpgi7579 15 93274677 to 93276030 1353 CpG island CpG island 7579
Tssr135963 15 93275122 to 93275143 21 - TSS region transcription start site region 135963
Tssr135964 15 93275154 to 93275178 24 - TSS region transcription start site region 135964
Yaf2 15 93284278 to 93336935 52657 - protein coding gene YY1 associated factor 2
D030074K08Rik 15 93287894 to 93291698 3804 unclassified gene RIKEN cDNA D030074K08 gene
Dshv1 15 103517472 to 92890759 -10626713 QTL dorsal hippocampal volume 1