Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:9223812-10273874

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105 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm8139 15 9250522 to 9261327 10805 - pseudogene predicted gene 8139
D15Mit175.3 15 9272838 to 9272991 153 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 175.3
Bpq31 15 9272936 to 9273109 173 QTL blood pressure QTL 31
D15Mit175 15 9272936 to 9273109 173 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 175
Ugt3a1 15 9279822 to 9315038 35216 + protein coding gene UDP glycosyltransferases 3 family, polypeptide A1
Tssr130630 15 9279841 to 9279865 24 + TSS region transcription start site region 130630
Tssr130631 15 9279872 to 9279881 9 + TSS region transcription start site region 130631
Gm2360 15 9318959 to 9322231 3272 + pseudogene predicted gene 2360
Ugt3a2 15 9335551 to 9370955 35404 + protein coding gene UDP glycosyltransferases 3 family, polypeptide A2
Tssr130632 15 9335565 to 9335623 58 + TSS region transcription start site region 130632
Tssr133691 15 9357073 to 9357077 4 - TSS region transcription start site region 133691
Tssr130633 15 9370333 to 9370344 11 + TSS region transcription start site region 130633
Tssr130634 15 9370380 to 9370391 11 + TSS region transcription start site region 130634
Tssr130635 15 9370397 to 9370407 10 + TSS region transcription start site region 130635
Tssr130636 15 9370697 to 9370704 7 + TSS region transcription start site region 130636
Gm5219 15 9424179 to 9431334 7155 + pseudogene predicted gene 5219
Capsl 15 9436028 to 9466038 30010 + protein coding gene calcyphosine-like
Tssr130637 15 9436039 to 9436083 44 + TSS region transcription start site region 130637
Tssr130638 15 9436085 to 9436103 18 + TSS region transcription start site region 130638
Tssr130639 15 9436108 to 9436125 17 + TSS region transcription start site region 130639
Tssr130640 15 9463496 to 9463516 20 + TSS region transcription start site region 130640
Tssr133692 15 9469445 to 9469456 11 - TSS region transcription start site region 133692
Il7r 15 9506159 to 9529935 23776 - protein coding gene interleukin 7 receptor
Tssr133693 15 9506750 to 9506762 12 - TSS region transcription start site region 133693
Tssr133694 15 9507113 to 9507125 12 - TSS region transcription start site region 133694
Tssr133695 15 9507436 to 9507448 12 - TSS region transcription start site region 133695
Tssr133696 15 9507776 to 9507804 28 - TSS region transcription start site region 133696
Tssr133697 15 9508757 to 9508786 29 - TSS region transcription start site region 133697
D15Mit264 15 9509776 to 9509925 149 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 264
Tssr133698 15 9516462 to 9516493 31 - TSS region transcription start site region 133698
Tssr133699 15 9524092 to 9524104 12 - TSS region transcription start site region 133699
Tssr133700 15 9524129 to 9524135 6 - TSS region transcription start site region 133700
Tssr130641 15 9524314 to 9524318 4 + TSS region transcription start site region 130641
Tssr130642 15 9524329 to 9524340 11 + TSS region transcription start site region 130642
Tssr130643 15 9524347 to 9524358 11 + TSS region transcription start site region 130643
Tssr130644 15 9525110 to 9525154 44 + TSS region transcription start site region 130644
Tssr130645 15 9527068 to 9527076 8 + TSS region transcription start site region 130645
Tssr133701 15 9528043 to 9528052 9 - TSS region transcription start site region 133701
Tssr133702 15 9528078 to 9528088 10 - TSS region transcription start site region 133702
Tssr130646 15 9528472 to 9528483 11 + TSS region transcription start site region 130646
Tssr130647 15 9528490 to 9528503 13 + TSS region transcription start site region 130647
Tssr130648 15 9528527 to 9528540 13 + TSS region transcription start site region 130648
Tssr133703 15 9529697 to 9529708 11 - TSS region transcription start site region 133703
Tssr133704 15 9529738 to 9529772 34 - TSS region transcription start site region 133704
Tssr133705 15 9529813 to 9529846 33 - TSS region transcription start site region 133705
Tssr133706 15 9529850 to 9529865 15 - TSS region transcription start site region 133706
Tssr133707 15 9529868 to 9529881 13 - TSS region transcription start site region 133707
Tssr133708 15 9530032 to 9530036 4 - TSS region transcription start site region 133708
Tssr133709 15 9530134 to 9530185 51 - TSS region transcription start site region 133709
Tssr133710 15 9530311 to 9530322 11 - TSS region transcription start site region 133710
Tssr130649 15 9533573 to 9533582 9 + TSS region transcription start site region 130649
Tssr130650 15 9533598 to 9533627 29 + TSS region transcription start site region 130650
Tssr133711 15 9535350 to 9535362 12 - TSS region transcription start site region 133711
Tssr130651 15 9547825 to 9547831 6 + TSS region transcription start site region 130651
Tssr130652 15 9554562 to 9554581 19 + TSS region transcription start site region 130652
Tssr130653 15 9554586 to 9554597 11 + TSS region transcription start site region 130653
Tssr133712 15 9555948 to 9555964 16 - TSS region transcription start site region 133712
Tssr130654 15 9556203 to 9556218 15 + TSS region transcription start site region 130654
Tssr4549 15 9567302 to 9567307 5 + TSS region transcription start site region 4549
Tssr133713 15 9572551 to 9572566 15 - TSS region transcription start site region 133713
Spef2 15 9578193 to 9748868 170675 - protein coding gene sperm flagellar 2
Tssr133714 15 9580622 to 9580633 11 - TSS region transcription start site region 133714
Tssr133715 15 9580646 to 9580655 9 - TSS region transcription start site region 133715
Tssr4550 15 9663676 to 9663677 1 + TSS region transcription start site region 4550
D15Mit11 15 9705772 to 9705870 98 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 11
Tssr133716 15 9748812 to 9748874 62 - TSS region transcription start site region 133716
Tssr130655 15 10035814 to 10035820 6 + TSS region transcription start site region 130655
Gm26350 15 10051826 to 10052113 287 + unclassified non-coding RNA gene predicted gene, 26350
Ffaq4 15 10101304 to 10101304 0 QTL free fatty acid QTL 4
Tssr130656 15 10177228 to 10177243 15 + TSS region transcription start site region 130656
Prlr 15 10177238 to 10349180 171942 + protein coding gene prolactin receptor
Tssr130657 15 10177258 to 10177265 7 + TSS region transcription start site region 130657
Tssr130658 15 10177370 to 10177392 22 + TSS region transcription start site region 130658
Tssr130659 15 10177545 to 10177552 7 + TSS region transcription start site region 130659
Tssr130660 15 10177588 to 10177591 3 + TSS region transcription start site region 130660
Tssr130661 15 10177601 to 10177608 7 + TSS region transcription start site region 130661
Tssr130662 15 10177623 to 10177654 31 + TSS region transcription start site region 130662
Cpgi6941 15 10177638 to 10178200 562 CpG island CpG island 6941
Tssr130663 15 10177663 to 10177674 11 + TSS region transcription start site region 130663
Tssr130664 15 10177738 to 10177745 7 + TSS region transcription start site region 130664
Tssr130665 15 10177767 to 10177773 6 + TSS region transcription start site region 130665
Gm41268 15 10199480 to 10203257 3777 - lncRNA gene predicted gene, 41268
Tssr130666 15 10215979 to 10216020 41 + TSS region transcription start site region 130666
Tssr130667 15 10216032 to 10216041 9 + TSS region transcription start site region 130667
Tssr4551 15 10223749 to 10223767 18 + TSS region transcription start site region 4551
Tssr130668 15 10223796 to 10223804 8 + TSS region transcription start site region 130668
Tssr130669 15 10223809 to 10223826 17 + TSS region transcription start site region 130669
Tssr130670 15 10223836 to 10223845 9 + TSS region transcription start site region 130670
Tssr130671 15 10223860 to 10223872 12 + TSS region transcription start site region 130671
Tssr130672 15 10223966 to 10223973 7 + TSS region transcription start site region 130672
Tssr130673 15 10223974 to 10224034 60 + TSS region transcription start site region 130673
Tssr130674 15 10224047 to 10224062 15 + TSS region transcription start site region 130674
Tssr130675 15 10225243 to 10225246 3 + TSS region transcription start site region 130675
Tssr133717 15 10229288 to 10229295 7 - TSS region transcription start site region 133717
Tssr133718 15 10229310 to 10229326 16 - TSS region transcription start site region 133718
Tssr130676 15 10249570 to 10249577 7 + TSS region transcription start site region 130676
Tssr130677 15 10249592 to 10249606 14 + TSS region transcription start site region 130677
Tssr130678 15 10253357 to 10253363 6 + TSS region transcription start site region 130678
Tssr130679 15 10267152 to 10267157 5 + TSS region transcription start site region 130679
Tssr130680 15 10269001 to 10269006 5 + TSS region transcription start site region 130680
Tssr133719 15 10272103 to 10272108 5 - TSS region transcription start site region 133719
Shali3 15 43448484 to 9272936 -34175548 QTL survival time to hyperoxic acute lung injury 3
Habiir5 15 43448484 to 9272936 -34175548 QTL hyperoxic acute lung injury imprinted region 5
Ssrq2 15 56323454 to 9272936 -47050518 QTL stress response QTL 2
Rapop5 15 79590561 to 9272936 -70317625 QTL radiation-induced apoptosis 5