Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:91811951-92981968

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrk2 15 91673175 to 91816120 142945 + protein coding gene leucine-rich repeat kinase 2
Gm15382 15 91822705 to 91823220 515 + pseudogene predicted gene 15382
Tssr132730 15 91838255 to 91838265 10 + TSS region transcription start site region 132730
Tssr132731 15 91838322 to 91838332 10 + TSS region transcription start site region 132731
Muc19 15 91838326 to 91934555 96229 + protein coding gene mucin 19
Smgc 15 91838328 to 91861435 23107 + protein coding gene submandibular gland protein C
Tssr132732 15 91898093 to 91898100 7 + TSS region transcription start site region 132732
Tssr132733 15 91899374 to 91899384 10 + TSS region transcription start site region 132733
Tssr132734 15 91899417 to 91899422 5 + TSS region transcription start site region 132734
Tssr132735 15 91906533 to 91906570 37 + TSS region transcription start site region 132735
Gm18979 15 91960740 to 91963518 2778 + pseudogene predicted gene, 18979
Gm3888 15 92026359 to 92027598 1239 - pseudogene predicted gene 3888
Cpgi7569 15 92051089 to 92051957 868 CpG island CpG island 7569
Tssr132736 15 92051153 to 92051170 17 + TSS region transcription start site region 132736
Cntn1 15 92051165 to 92341967 290802 + protein coding gene contactin 1
Tssr132737 15 92051176 to 92051225 49 + TSS region transcription start site region 132737
Tssr132738 15 92051236 to 92051243 7 + TSS region transcription start site region 132738
Tssr132739 15 92051255 to 92051262 7 + TSS region transcription start site region 132739
Tssr132740 15 92051277 to 92051288 11 + TSS region transcription start site region 132740
Tssr132741 15 92054155 to 92054157 2 + TSS region transcription start site region 132741
Tssr132742 15 92160685 to 92160696 11 + TSS region transcription start site region 132742
Tssr132743 15 92161164 to 92161221 57 + TSS region transcription start site region 132743
Tssr132744 15 92161238 to 92161311 73 + TSS region transcription start site region 132744
Tssr132745 15 92161321 to 92161339 18 + TSS region transcription start site region 132745
Tssr132746 15 92161343 to 92161366 23 + TSS region transcription start site region 132746
Tssr132747 15 92161410 to 92161431 21 + TSS region transcription start site region 132747
Tssr132748 15 92161444 to 92161461 17 + TSS region transcription start site region 132748
Tssr132749 15 92161464 to 92161482 18 + TSS region transcription start site region 132749
Tssr132750 15 92161535 to 92161551 16 + TSS region transcription start site region 132750
Tssr132751 15 92161563 to 92161581 18 + TSS region transcription start site region 132751
Gm36901 15 92170457 to 92201076 30619 - lncRNA gene predicted gene, 36901
C230079E05Rik 15 92173182 to 92177369 4187 unclassified gene RIKEN cDNA C230079E05 gene
D15Dcr7 15 92207057 to 92207152 95 DNA segment DNA Segment, Chr 15, Derry C. Roopenian 7
Tssr132752 15 92243651 to 92243654 3 + TSS region transcription start site region 132752
Cpgi7570 15 92271181 to 92271432 251 CpG island CpG island 7570
Tssr132753 15 92321882 to 92321895 13 + TSS region transcription start site region 132753
Tssr132754 15 92322073 to 92322076 3 + TSS region transcription start site region 132754
Tssr132755 15 92340332 to 92340352 20 + TSS region transcription start site region 132755
Gm26760 15 92343775 to 92366929 23154 + lincRNA gene predicted gene, 26760
Tssr132756 15 92344365 to 92344383 18 + TSS region transcription start site region 132756
2900072G19Rik 15 92350468 to 92351164 696 unclassified gene RIKEN cDNA 2900072G19 gene
Cpgi7571 15 92396800 to 92397645 845 CpG island CpG island 7571
Pdzrn4 15 92396881 to 92771819 374938 + protein coding gene PDZ domain containing RING finger 4
Tssr4697 15 92396951 to 92396968 17 + TSS region transcription start site region 4697
Tssr132757 15 92486670 to 92486702 32 + TSS region transcription start site region 132757
Cpgi7572 15 92510337 to 92510541 204 CpG island CpG island 7572
AW742948 15 92520479 to 92523958 3479 unclassified gene expressed sequence AW742948
Tssr132758 15 92597104 to 92597121 17 + TSS region transcription start site region 132758
Cpgi7573 15 92597120 to 92597474 354 CpG island CpG island 7573
Tssr132759 15 92597129 to 92597167 38 + TSS region transcription start site region 132759
Tssr132760 15 92701425 to 92701438 13 + TSS region transcription start site region 132760
4930588J15Rik 15 92702886 to 92705955 3069 - antisense lncRNA gene RIKEN cDNA 4930588J15 gene
Tssr135959 15 92705953 to 92705970 17 - TSS region transcription start site region 135959
Cpgi7574 15 92752516 to 92752814 298 CpG island CpG island 7574
Cpgi7575 15 92769557 to 92770161 604 CpG island CpG island 7575
Cpgi7576 15 92770654 to 92770871 217 CpG island CpG island 7576
D15Mit147.2 15 92890608 to 92890799 191 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 147.2
D15Mit192 15 92890738 to 92890913 175 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 192
D15Mit147 15 92890759 to 92890895 136 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 147
D15Mit223 15 92907514 to 92907838 324 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 223
D15Mit223.2 15 92907600 to 92907756 156 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 223.2
D15Mit223.1 15 92907821 to 92907932 111 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 223.1
Gm49418 15 92933889 to 92950171 16282 + lincRNA gene predicted gene, 49418
Gm18815 15 92968815 to 92970297 1482 + pseudogene predicted gene, 18815
Dshv1 15 103517472 to 92890759 -10626713 QTL dorsal hippocampal volume 1