Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:90526396-91263476

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pain1 15 75448997 to 90928982 15479985 QTL pain 1
Cpne8 15 90487482 to 90679432 191950 - protein coding gene copine VIII
Tssr135924 15 90545137 to 90545139 2 - TSS region transcription start site region 135924
Aath8 15 90545941 to 90545941 0 QTL aortic arch atherosclerosis 8
Gm6746 15 90561347 to 90561829 482 + pseudogene predicted pseudogene 6746
Tssr4691 15 90610976 to 90610979 3 + TSS region transcription start site region 4691
Tssr135925 15 90678518 to 90678524 6 - TSS region transcription start site region 135925
Cpgi7561 15 90678606 to 90680368 1762 CpG island CpG island 7561
Tssr135926 15 90679307 to 90679388 81 - TSS region transcription start site region 135926
Gm49541 15 90702369 to 90702558 189 + pseudogene predicted gene, 49541
Gm3861 15 90723648 to 90723996 348 + pseudogene predicted gene 3861
D15Mit34 15 90753375 to 90753521 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 34
Rpl31-ps8 15 90764279 to 90764656 377 - pseudogene ribosomal protein L31, pseudogene 8
Tssr135927 15 90829817 to 90829818 1 - TSS region transcription start site region 135927
Tcea1-ps1 15 90882615 to 90883518 903 + pseudogene transcription elongation factor A (SII) 1, pseudogene 1
Tssr132706 15 90883047 to 90883056 9 + TSS region transcription start site region 132706
Spn-ps 15 90891396 to 90898476 7080 - pseudogene sialophorin, pseudogene
Tssr135928 15 90898394 to 90898409 15 - TSS region transcription start site region 135928
Tssr135929 15 90898411 to 90898420 9 - TSS region transcription start site region 135929
Tssr135930 15 90898421 to 90898424 3 - TSS region transcription start site region 135930
Tssr135931 15 90898425 to 90898430 5 - TSS region transcription start site region 135931
Tssr135932 15 90898439 to 90898446 7 - TSS region transcription start site region 135932
Tssr135933 15 90898463 to 90898472 9 - TSS region transcription start site region 135933
Tssr135934 15 90898485 to 90898497 12 - TSS region transcription start site region 135934
Tssr135935 15 90898512 to 90898522 10 - TSS region transcription start site region 135935
Tssr135936 15 90898541 to 90898542 1 - TSS region transcription start site region 135936
Tssr135937 15 90915969 to 90915975 6 - TSS region transcription start site region 135937
Gm36618 15 90916161 to 90919638 3477 + lncRNA gene predicted gene, 36618
Kif21a 15 90933276 to 91049948 116672 - protein coding gene kinesin family member 21A
Tssr135938 15 90940680 to 90940706 26 - TSS region transcription start site region 135938
Tssr135939 15 90943617 to 90943641 24 - TSS region transcription start site region 135939
Gm49545 15 90957996 to 90958668 672 + pseudogene predicted gene, 49545
Tssr135940 15 90980990 to 90981002 12 - TSS region transcription start site region 135940
Tssr132707 15 90986232 to 90986233 1 + TSS region transcription start site region 132707
Tssr135941 15 91017982 to 91018005 23 - TSS region transcription start site region 135941
Tssr132708 15 91037495 to 91037501 6 + TSS region transcription start site region 132708
D15Mit191 15 91043721 to 91043920 199 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 191
Tssr135942 15 91048105 to 91048111 6 - TSS region transcription start site region 135942
Cpgi7562 15 91048960 to 91050293 1333 CpG island CpG island 7562
Tssr135943 15 91049823 to 91049867 44 - TSS region transcription start site region 135943
Tssr135944 15 91050225 to 91050237 12 - TSS region transcription start site region 135944
Gm36710 15 91050723 to 91051053 330 - lncRNA gene predicted gene, 36710
Gm18814 15 91074162 to 91075149 987 + pseudogene predicted gene, 18814
Cpgi7563 15 91105965 to 91106259 294 CpG island CpG island 7563
Gm7167 15 91128728 to 91129897 1169 - pseudogene predicted gene 7167
Abcd2 15 91145871 to 91191799 45928 - protein coding gene ATP-binding cassette, sub-family D (ALD), member 2
Tssr135945 15 91172187 to 91172192 5 - TSS region transcription start site region 135945
Tssr135946 15 91190985 to 91190994 9 - TSS region transcription start site region 135946
Tssr135947 15 91191385 to 91191401 16 - TSS region transcription start site region 135947
Tssr135948 15 91191405 to 91191432 27 - TSS region transcription start site region 135948
Tssr135949 15 91191440 to 91191455 15 - TSS region transcription start site region 135949
Tssr135950 15 91191513 to 91191525 12 - TSS region transcription start site region 135950
Tssr135951 15 91191711 to 91191722 11 - TSS region transcription start site region 135951
Tssr135952 15 91191733 to 91191825 92 - TSS region transcription start site region 135952
Tssr135953 15 91192010 to 91192027 17 - TSS region transcription start site region 135953
Tssr135954 15 91192032 to 91192050 18 - TSS region transcription start site region 135954
Cpgi7564 15 91199304 to 91199683 379 CpG island CpG island 7564
Tssr132709 15 91199453 to 91199462 9 + TSS region transcription start site region 132709
Tssr132710 15 91199476 to 91199497 21 + TSS region transcription start site region 132710
CN725425 15 91199494 to 91260894 61400 + protein coding gene cDNA sequence CN725425
D15Mit172 15 91202080 to 91202217 137 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 172