MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 15:90220262-90560365

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Alprf	15	87465070 to 90390365	2925295		QTL	alcohol preference
Cpgi7560	15	90224012 to 90224769	757		CpG island	CpG island 7560
Tssr135922	15	90224109 to 90224159	50	-	TSS region	transcription start site region 135922
Tssr132702	15	90224277 to 90224291	14	+	TSS region	transcription start site region 132702
Tssr132703	15	90224293 to 90224374	81	+	TSS region	transcription start site region 132703
Alg10b	15	90224311 to 90230554	6243	+	protein coding gene	asparagine-linked glycosylation 10B (alpha-1,2-glucosyltransferase)
Mir7648	15	90224360 to 90224412	52	+	miRNA gene	microRNA 7648
Tssr132704	15	90224448 to 90224461	13	+	TSS region	transcription start site region 132704
Tssr132705	15	90303466 to 90303469	3	+	TSS region	transcription start site region 132705
Tssr135923	15	90316443 to 90316447	4	-	TSS region	transcription start site region 135923
D15Mit74	15	90334101 to 90334334	233		DNA segment	DNA segment, Chr 15, Massachusetts Institute of Technology 74
4933423N12Rik	15	90345915 to 90346833	918		unclassified gene	RIKEN cDNA 4933423N12 gene
Gm36480	15	90353710 to 90368444	14734	+	lincRNA gene	predicted gene, 36480
D15Mit242	15	90390262 to 90390365	103		DNA segment	DNA Segment, Chr 15, Massachusetts Institute of Technology 242
Gm18372	15	90451701 to 90452546	845	-	pseudogene	predicted gene, 18372
Cpne8	15	90487482 to 90679432	191950	-	protein coding gene	copine VIII
Tssr135924	15	90545137 to 90545139	2	-	TSS region	transcription start site region 135924
Aath8	15	90545941 to 90545941	0		QTL	aortic arch atherosclerosis 8