Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89538264-89598274

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shank3 15 89499705 to 89560261 60556 + protein coding gene SH3 and multiple ankyrin repeat domains 3
Tssr4690 15 89542585 to 89542588 3 + TSS region transcription start site region 4690
Cpgi7555 15 89547406 to 89548897 1491 CpG island CpG island 7555
Tssr132695 15 89548474 to 89548498 24 + TSS region transcription start site region 132695
Tssr132696 15 89553310 to 89553314 4 + TSS region transcription start site region 132696
Cpgi7556 15 89557639 to 89558497 858 CpG island CpG island 7556
Gm36221 15 89567167 to 89568205 1038 - lncRNA gene predicted gene, 36221
Tssr135915 15 89568233 to 89568238 5 - TSS region transcription start site region 135915
Tssr135916 15 89568242 to 89568257 15 - TSS region transcription start site region 135916
Tssr135917 15 89568264 to 89568274 10 - TSS region transcription start site region 135917
Tssr132697 15 89568322 to 89568325 3 + TSS region transcription start site region 132697
Acr 15 89568326 to 89574585 6259 + protein coding gene acrosin prepropeptide
Tssr132698 15 89568327 to 89568383 56 + TSS region transcription start site region 132698
Tssr132699 15 89573905 to 89573915 10 + TSS region transcription start site region 132699
Cpgi7557 15 89574002 to 89574156 154 CpG island CpG island 7557
Tssr132700 15 89574187 to 89574202 15 + TSS region transcription start site region 132700
Rabl2 15 89582533 to 89591923 9390 - protein coding gene RAB, member RAS oncogene family-like 2
Cpgi7558 15 89591262 to 89592103 841 CpG island CpG island 7558
Tssr135918 15 89591855 to 89591916 61 - TSS region transcription start site region 135918