Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89460069-89540108

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mapk8ip2 15 89453911 to 89462447 8536 + protein coding gene mitogen-activated protein kinase 8 interacting protein 2
Arsa 15 89472476 to 89477424 4948 - protein coding gene arylsulfatase A
Cpgi7551 15 89475947 to 89476555 608 CpG island CpG island 7551
Tssr135903 15 89476092 to 89476138 46 - TSS region transcription start site region 135903
Tssr135904 15 89476140 to 89476184 44 - TSS region transcription start site region 135904
C230037L18Rik 15 89476252 to 89484850 8598 + antisense lncRNA gene RIKEN cDNA C230037L18 gene
Tssr135905 15 89476317 to 89476328 11 - TSS region transcription start site region 135905
Tssr135906 15 89476342 to 89476370 28 - TSS region transcription start site region 135906
Tssr135907 15 89476386 to 89476391 5 - TSS region transcription start site region 135907
Tssr135908 15 89476404 to 89476407 3 - TSS region transcription start site region 135908
Tssr135909 15 89476485 to 89476525 40 - TSS region transcription start site region 135909
Tssr135910 15 89477058 to 89477085 27 - TSS region transcription start site region 135910
Tssr135911 15 89477400 to 89477420 20 - TSS region transcription start site region 135911
Tssr135912 15 89477439 to 89477450 11 - TSS region transcription start site region 135912
Gm41381 15 89497719 to 89499469 1750 + lncRNA gene predicted gene, 41381
Tssr132682 15 89497919 to 89497934 15 + TSS region transcription start site region 132682
Tssr132683 15 89497959 to 89497968 9 + TSS region transcription start site region 132683
Tssr132684 15 89497983 to 89497994 11 + TSS region transcription start site region 132684
Tssr132685 15 89498002 to 89498012 10 + TSS region transcription start site region 132685
Tssr132686 15 89498013 to 89498046 33 + TSS region transcription start site region 132686
Tssr132687 15 89498048 to 89498069 21 + TSS region transcription start site region 132687
Cpgi7552 15 89498463 to 89500828 2365 CpG island CpG island 7552
Tssr132688 15 89499598 to 89499653 55 + TSS region transcription start site region 132688
Shank3 15 89499705 to 89560261 60556 + protein coding gene SH3 and multiple ankyrin repeat domains 3
Tssr132689 15 89499918 to 89499922 4 + TSS region transcription start site region 132689
Tssr132690 15 89500069 to 89500108 39 + TSS region transcription start site region 132690
Tssr132691 15 89500116 to 89500145 29 + TSS region transcription start site region 132691
Gm15609 15 89520096 to 89523677 3581 - lincRNA gene predicted gene 15609
Cpgi7553 15 89523269 to 89524854 1585 CpG island CpG island 7553
Tssr135913 15 89523634 to 89523645 11 - TSS region transcription start site region 135913
Tssr135914 15 89523690 to 89523710 20 - TSS region transcription start site region 135914
Tssr132692 15 89523707 to 89523743 36 + TSS region transcription start site region 132692
Tssr132693 15 89523752 to 89523793 41 + TSS region transcription start site region 132693
Cpgi7554 15 89532730 to 89532973 243 CpG island CpG island 7554
Tssr132694 15 89532816 to 89532870 54 + TSS region transcription start site region 132694