Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89409802-89449820

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syce3 15 89390174 to 89410503 20329 - protein coding gene synaptonemal complex central element protein 3
Cpgi7545 15 89409955 to 89410382 427 CpG island CpG island 7545
Tssr135885 15 89410230 to 89410271 41 - TSS region transcription start site region 135885
Gm44502 15 89416405 to 89429696 13291 - lncRNA gene predicted readthrough transcript (NMD candidate), 44502
Cpt1b 15 89416405 to 89425862 9457 - protein coding gene carnitine palmitoyltransferase 1b, muscle
Tssr135886 15 89416659 to 89416663 4 - TSS region transcription start site region 135886
Tssr135887 15 89424765 to 89424780 15 - TSS region transcription start site region 135887
Tssr132671 15 89425289 to 89425294 5 + TSS region transcription start site region 132671
Tssr135888 15 89425309 to 89425314 5 - TSS region transcription start site region 135888
Tssr135889 15 89425326 to 89425357 31 - TSS region transcription start site region 135889
Cpgi7546 15 89425501 to 89425704 203 CpG island CpG island 7546
Tssr135890 15 89425534 to 89425551 17 - TSS region transcription start site region 135890
Tssr135891 15 89425600 to 89425631 31 - TSS region transcription start site region 135891
Tssr135892 15 89425818 to 89425851 33 - TSS region transcription start site region 135892
Tssr135893 15 89425856 to 89425872 16 - TSS region transcription start site region 135893
Tssr135894 15 89426236 to 89426260 24 - TSS region transcription start site region 135894
Chkb 15 89426360 to 89429908 3548 - protein coding gene choline kinase beta
Cpgi7547 15 89428766 to 89430243 1477 CpG island CpG island 7547
Tssr135895 15 89429214 to 89429223 9 - TSS region transcription start site region 135895
Tssr135896 15 89429333 to 89429351 18 - TSS region transcription start site region 135896
Tssr135897 15 89429397 to 89429441 44 - TSS region transcription start site region 135897
Tssr132672 15 89429560 to 89429579 19 + TSS region transcription start site region 132672
C730034F03Rik 15 89429589 to 89430868 1279 + unclassified gene RIKEN cDNA C730034F03 gene
Tssr135898 15 89429632 to 89429680 48 - TSS region transcription start site region 135898
Tssr135899 15 89429802 to 89429820 18 - TSS region transcription start site region 135899
Tssr135900 15 89429821 to 89429832 11 - TSS region transcription start site region 135900
Tssr135901 15 89429851 to 89429935 84 - TSS region transcription start site region 135901
Tssr132673 15 89430059 to 89430064 5 + TSS region transcription start site region 132673
D15Mit190 15 89430866 to 89430990 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 190