Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89399821-89459832

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syce3 15 89390174 to 89410503 20329 - protein coding gene synaptonemal complex central element protein 3
Cpgi7545 15 89409955 to 89410382 427 CpG island CpG island 7545
Tssr135885 15 89410230 to 89410271 41 - TSS region transcription start site region 135885
Gm44502 15 89416405 to 89429696 13291 - lncRNA gene predicted readthrough transcript (NMD candidate), 44502
Cpt1b 15 89416405 to 89425862 9457 - protein coding gene carnitine palmitoyltransferase 1b, muscle
Tssr135886 15 89416659 to 89416663 4 - TSS region transcription start site region 135886
Tssr135887 15 89424765 to 89424780 15 - TSS region transcription start site region 135887
Tssr132671 15 89425289 to 89425294 5 + TSS region transcription start site region 132671
Tssr135888 15 89425309 to 89425314 5 - TSS region transcription start site region 135888
Tssr135889 15 89425326 to 89425357 31 - TSS region transcription start site region 135889
Cpgi7546 15 89425501 to 89425704 203 CpG island CpG island 7546
Tssr135890 15 89425534 to 89425551 17 - TSS region transcription start site region 135890
Tssr135891 15 89425600 to 89425631 31 - TSS region transcription start site region 135891
Tssr135892 15 89425818 to 89425851 33 - TSS region transcription start site region 135892
Tssr135893 15 89425856 to 89425872 16 - TSS region transcription start site region 135893
Tssr135894 15 89426236 to 89426260 24 - TSS region transcription start site region 135894
Chkb 15 89426360 to 89429908 3548 - protein coding gene choline kinase beta
Cpgi7547 15 89428766 to 89430243 1477 CpG island CpG island 7547
Tssr135895 15 89429214 to 89429223 9 - TSS region transcription start site region 135895
Tssr135896 15 89429333 to 89429351 18 - TSS region transcription start site region 135896
Tssr135897 15 89429397 to 89429441 44 - TSS region transcription start site region 135897
Tssr132672 15 89429560 to 89429579 19 + TSS region transcription start site region 132672
C730034F03Rik 15 89429589 to 89430868 1279 + unclassified gene RIKEN cDNA C730034F03 gene
Tssr135898 15 89429632 to 89429680 48 - TSS region transcription start site region 135898
Tssr135899 15 89429802 to 89429820 18 - TSS region transcription start site region 135899
Tssr135900 15 89429821 to 89429832 11 - TSS region transcription start site region 135900
Tssr135901 15 89429851 to 89429935 84 - TSS region transcription start site region 135901
Tssr132673 15 89430059 to 89430064 5 + TSS region transcription start site region 132673
D15Mit190 15 89430866 to 89430990 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 190
Cpgi7548 15 89453463 to 89454584 1121 CpG island CpG island 7548
Tssr132674 15 89453698 to 89453761 63 + TSS region transcription start site region 132674
Tssr132675 15 89453790 to 89453835 45 + TSS region transcription start site region 132675
Mapk8ip2 15 89453911 to 89462447 8536 + protein coding gene mitogen-activated protein kinase 8 interacting protein 2
Tssr132676 15 89453913 to 89453934 21 + TSS region transcription start site region 132676
Tssr132677 15 89454019 to 89454095 76 + TSS region transcription start site region 132677
Tssr132678 15 89454107 to 89454114 7 + TSS region transcription start site region 132678
Tssr132679 15 89454124 to 89454145 21 + TSS region transcription start site region 132679
Tssr132680 15 89454168 to 89454217 49 + TSS region transcription start site region 132680
Tssr135902 15 89456677 to 89456689 12 - TSS region transcription start site region 135902
Tssr132681 15 89456733 to 89456738 5 + TSS region transcription start site region 132681
Cpgi7549 15 89457243 to 89458313 1070 CpG island CpG island 7549
Cpgi7550 15 89458891 to 89459275 384 CpG island CpG island 7550