Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89374955-89445382

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tymp 15 89371931 to 89377036 5105 - protein coding gene thymidine phosphorylase
4930423K06Rik 15 89373625 to 89375717 2092 unclassified non-coding RNA gene RIKEN cDNA 4930423K06 gene
Tssr132666 15 89376342 to 89376364 22 + TSS region transcription start site region 132666
Tssr135875 15 89377058 to 89377102 44 - TSS region transcription start site region 135875
Tssr135876 15 89377103 to 89377114 11 - TSS region transcription start site region 135876
Cpgi7542 15 89377220 to 89377825 605 CpG island CpG island 7542
Odf3b 15 89377449 to 89379282 1833 - protein coding gene outer dense fiber of sperm tails 3B
Tssr132667 15 89377718 to 89377726 8 + TSS region transcription start site region 132667
Cpgi7543 15 89378154 to 89379382 1228 CpG island CpG island 7543
Tssr135877 15 89378932 to 89378943 11 - TSS region transcription start site region 135877
Tssr135878 15 89378949 to 89378962 13 - TSS region transcription start site region 135878
Tssr135879 15 89378971 to 89378994 23 - TSS region transcription start site region 135879
Tssr135880 15 89378996 to 89379028 32 - TSS region transcription start site region 135880
Tssr135881 15 89379164 to 89379175 11 - TSS region transcription start site region 135881
Tssr135882 15 89379246 to 89379262 16 - TSS region transcription start site region 135882
Tssr135883 15 89379264 to 89379300 36 - TSS region transcription start site region 135883
Tssr135884 15 89379588 to 89379618 30 - TSS region transcription start site region 135884
Tssr4689 15 89384860 to 89384867 7 + TSS region transcription start site region 4689
Tssr132668 15 89384875 to 89384884 9 + TSS region transcription start site region 132668
Tssr132669 15 89384888 to 89384899 11 + TSS region transcription start site region 132669
Tssr132670 15 89384902 to 89384910 8 + TSS region transcription start site region 132670
Klhdc7b 15 89386891 to 89388708 1817 + protein coding gene kelch domain containing 7B
Cpgi7544 15 89388164 to 89388576 412 CpG island CpG island 7544
Syce3 15 89390174 to 89410503 20329 - protein coding gene synaptonemal complex central element protein 3
Cpgi7545 15 89409955 to 89410382 427 CpG island CpG island 7545
Tssr135885 15 89410230 to 89410271 41 - TSS region transcription start site region 135885
Cpt1b 15 89416405 to 89425862 9457 - protein coding gene carnitine palmitoyltransferase 1b, muscle
Gm44502 15 89416405 to 89429696 13291 - lncRNA gene predicted readthrough transcript (NMD candidate), 44502
Tssr135886 15 89416659 to 89416663 4 - TSS region transcription start site region 135886
Tssr135887 15 89424765 to 89424780 15 - TSS region transcription start site region 135887
Tssr132671 15 89425289 to 89425294 5 + TSS region transcription start site region 132671
Tssr135888 15 89425309 to 89425314 5 - TSS region transcription start site region 135888
Tssr135889 15 89425326 to 89425357 31 - TSS region transcription start site region 135889
Cpgi7546 15 89425501 to 89425704 203 CpG island CpG island 7546
Tssr135890 15 89425534 to 89425551 17 - TSS region transcription start site region 135890
Tssr135891 15 89425600 to 89425631 31 - TSS region transcription start site region 135891
Tssr135892 15 89425818 to 89425851 33 - TSS region transcription start site region 135892
Tssr135893 15 89425856 to 89425872 16 - TSS region transcription start site region 135893
Tssr135894 15 89426236 to 89426260 24 - TSS region transcription start site region 135894
Chkb 15 89426360 to 89429908 3548 - protein coding gene choline kinase beta
Cpgi7547 15 89428766 to 89430243 1477 CpG island CpG island 7547
Tssr135895 15 89429214 to 89429223 9 - TSS region transcription start site region 135895
Tssr135896 15 89429333 to 89429351 18 - TSS region transcription start site region 135896
Tssr135897 15 89429397 to 89429441 44 - TSS region transcription start site region 135897
Tssr132672 15 89429560 to 89429579 19 + TSS region transcription start site region 132672
C730034F03Rik 15 89429589 to 89430868 1279 + unclassified gene RIKEN cDNA C730034F03 gene
Tssr135898 15 89429632 to 89429680 48 - TSS region transcription start site region 135898
Tssr135899 15 89429802 to 89429820 18 - TSS region transcription start site region 135899
Tssr135900 15 89429821 to 89429832 11 - TSS region transcription start site region 135900
Tssr135901 15 89429851 to 89429935 84 - TSS region transcription start site region 135901
Tssr132673 15 89430059 to 89430064 5 + TSS region transcription start site region 132673
D15Mit190 15 89430866 to 89430990 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 190