Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89364008-89384030

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncaph2 15 89355719 to 89372826 17107 + protein coding gene non-SMC condensin II complex, subunit H2
Tssr132663 15 89370526 to 89370543 17 + TSS region transcription start site region 132663
Sco2 15 89371637 to 89373818 2181 - protein coding gene SCO2 cytochrome c oxidase assembly protein
Tymp 15 89371931 to 89377036 5105 - protein coding gene thymidine phosphorylase
Cpgi7541 15 89373331 to 89374434 1103 CpG island CpG island 7541
4930423K06Rik 15 89373625 to 89375717 2092 unclassified non-coding RNA gene RIKEN cDNA 4930423K06 gene
Tssr135869 15 89373810 to 89373829 19 - TSS region transcription start site region 135869
Tssr135870 15 89373831 to 89373860 29 - TSS region transcription start site region 135870
Tssr135871 15 89373865 to 89373901 36 - TSS region transcription start site region 135871
Tssr132664 15 89373903 to 89373928 25 + TSS region transcription start site region 132664
Tssr132665 15 89373934 to 89373961 27 + TSS region transcription start site region 132665
Tssr135872 15 89374008 to 89374030 22 - TSS region transcription start site region 135872
Tssr135873 15 89374039 to 89374074 35 - TSS region transcription start site region 135873
Tssr135874 15 89374083 to 89374145 62 - TSS region transcription start site region 135874
Tssr132666 15 89376342 to 89376364 22 + TSS region transcription start site region 132666
Tssr135875 15 89377058 to 89377102 44 - TSS region transcription start site region 135875
Tssr135876 15 89377103 to 89377114 11 - TSS region transcription start site region 135876
Cpgi7542 15 89377220 to 89377825 605 CpG island CpG island 7542
Odf3b 15 89377449 to 89379282 1833 - protein coding gene outer dense fiber of sperm tails 3B
Tssr132667 15 89377718 to 89377726 8 + TSS region transcription start site region 132667
Cpgi7543 15 89378154 to 89379382 1228 CpG island CpG island 7543
Tssr135877 15 89378932 to 89378943 11 - TSS region transcription start site region 135877
Tssr135878 15 89378949 to 89378962 13 - TSS region transcription start site region 135878
Tssr135879 15 89378971 to 89378994 23 - TSS region transcription start site region 135879
Tssr135880 15 89378996 to 89379028 32 - TSS region transcription start site region 135880
Tssr135881 15 89379164 to 89379175 11 - TSS region transcription start site region 135881
Tssr135882 15 89379246 to 89379262 16 - TSS region transcription start site region 135882
Tssr135883 15 89379264 to 89379300 36 - TSS region transcription start site region 135883
Tssr135884 15 89379588 to 89379618 30 - TSS region transcription start site region 135884