Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89201953-89371957

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7536 15 89211242 to 89212389 1147 CpG island CpG island 7536
Tssr132647 15 89211522 to 89211606 84 + TSS region transcription start site region 132647
Ppp6r2 15 89211553 to 89287010 75457 + protein coding gene protein phosphatase 6, regulatory subunit 2
Gm26798 15 89211559 to 89215012 3453 - lincRNA gene predicted gene, 26798
Tssr132648 15 89211607 to 89211620 13 + TSS region transcription start site region 132648
Tssr132649 15 89212309 to 89212311 2 + TSS region transcription start site region 132649
D15Jmp10 15 89241691 to 89241847 156 DNA segment DNA segment, Chr 15, Jackson Laboratory Mapping Panels 10
Tssr132650 15 89243315 to 89243330 15 + TSS region transcription start site region 132650
Tssr132651 15 89243331 to 89243366 35 + TSS region transcription start site region 132651
Tssr132652 15 89286550 to 89286551 1 + TSS region transcription start site region 132652
Tssr132653 15 89286953 to 89286957 4 + TSS region transcription start site region 132653
Sbf1 15 89288236 to 89315311 27075 - protein coding gene SET binding factor 1
Mir6959 15 89305658 to 89305732 74 - miRNA gene microRNA 6959
Tssr135862 15 89309970 to 89310002 32 - TSS region transcription start site region 135862
Cpgi7537 15 89314456 to 89315711 1255 CpG island CpG island 7537
Tssr135863 15 89315253 to 89315312 59 - TSS region transcription start site region 135863
Adm2 15 89322720 to 89324731 2011 + protein coding gene adrenomedullin 2
Cpgi7538 15 89322814 to 89323118 304 CpG island CpG island 7538
Tssr132654 15 89322929 to 89322960 31 + TSS region transcription start site region 132654
Tssr132655 15 89322969 to 89322986 17 + TSS region transcription start site region 132655
Tssr132656 15 89334453 to 89334472 19 + TSS region transcription start site region 132656
Miox 15 89334473 to 89337007 2534 + protein coding gene myo-inositol oxygenase
Tssr132657 15 89334970 to 89334979 9 + TSS region transcription start site region 132657
Tssr132658 15 89334986 to 89335017 31 + TSS region transcription start site region 132658
Cpgi7539 15 89335588 to 89335785 197 CpG island CpG island 7539
Tssr132659 15 89336016 to 89336025 9 + TSS region transcription start site region 132659
Tssr4688 15 89336853 to 89336862 9 + TSS region transcription start site region 4688
Tssr135864 15 89336886 to 89336896 10 - TSS region transcription start site region 135864
D15Jmp11 15 89349297 to 89349493 196 DNA segment DNA segment, Chr 15, Jackson Laboratory Mapping Panels 11
Lmf2 15 89351004 to 89355659 4655 - protein coding gene lipase maturation factor 2
Cpgi7540 15 89355203 to 89356050 847 CpG island CpG island 7540
Tssr135865 15 89355468 to 89355498 30 - TSS region transcription start site region 135865
Tssr135866 15 89355529 to 89355632 103 - TSS region transcription start site region 135866
Tssr135867 15 89355655 to 89355668 13 - TSS region transcription start site region 135867
Tssr132660 15 89355716 to 89355727 11 + TSS region transcription start site region 132660
Ncaph2 15 89355719 to 89372826 17107 + protein coding gene non-SMC condensin II complex, subunit H2
Tssr132661 15 89355730 to 89355741 11 + TSS region transcription start site region 132661
Tssr132662 15 89355755 to 89355782 27 + TSS region transcription start site region 132662
Tssr135868 15 89356451 to 89356458 7 - TSS region transcription start site region 135868
Tssr132663 15 89370526 to 89370543 17 + TSS region transcription start site region 132663
Sco2 15 89371637 to 89373818 2181 - protein coding gene SCO2 cytochrome c oxidase assembly protein
Tymp 15 89371931 to 89377036 5105 - protein coding gene thymidine phosphorylase