Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89196953-89376957

Filter by:
54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
5730424H11Rik 15 89196148 to 89198429 2281 unclassified gene RIKEN cDNA 5730424H11 gene
Cpgi7536 15 89211242 to 89212389 1147 CpG island CpG island 7536
Tssr132647 15 89211522 to 89211606 84 + TSS region transcription start site region 132647
Ppp6r2 15 89211553 to 89287010 75457 + protein coding gene protein phosphatase 6, regulatory subunit 2
Gm26798 15 89211559 to 89215012 3453 - lincRNA gene predicted gene, 26798
Tssr132648 15 89211607 to 89211620 13 + TSS region transcription start site region 132648
Tssr132649 15 89212309 to 89212311 2 + TSS region transcription start site region 132649
D15Jmp10 15 89241691 to 89241847 156 DNA segment DNA segment, Chr 15, Jackson Laboratory Mapping Panels 10
Tssr132650 15 89243315 to 89243330 15 + TSS region transcription start site region 132650
Tssr132651 15 89243331 to 89243366 35 + TSS region transcription start site region 132651
Tssr132652 15 89286550 to 89286551 1 + TSS region transcription start site region 132652
Tssr132653 15 89286953 to 89286957 4 + TSS region transcription start site region 132653
Sbf1 15 89288236 to 89315311 27075 - protein coding gene SET binding factor 1
Mir6959 15 89305658 to 89305732 74 - miRNA gene microRNA 6959
Tssr135862 15 89309970 to 89310002 32 - TSS region transcription start site region 135862
Cpgi7537 15 89314456 to 89315711 1255 CpG island CpG island 7537
Tssr135863 15 89315253 to 89315312 59 - TSS region transcription start site region 135863
Adm2 15 89322720 to 89324731 2011 + protein coding gene adrenomedullin 2
Cpgi7538 15 89322814 to 89323118 304 CpG island CpG island 7538
Tssr132654 15 89322929 to 89322960 31 + TSS region transcription start site region 132654
Tssr132655 15 89322969 to 89322986 17 + TSS region transcription start site region 132655
Tssr132656 15 89334453 to 89334472 19 + TSS region transcription start site region 132656
Miox 15 89334473 to 89337007 2534 + protein coding gene myo-inositol oxygenase
Tssr132657 15 89334970 to 89334979 9 + TSS region transcription start site region 132657
Tssr132658 15 89334986 to 89335017 31 + TSS region transcription start site region 132658
Cpgi7539 15 89335588 to 89335785 197 CpG island CpG island 7539
Tssr132659 15 89336016 to 89336025 9 + TSS region transcription start site region 132659
Tssr4688 15 89336853 to 89336862 9 + TSS region transcription start site region 4688
Tssr135864 15 89336886 to 89336896 10 - TSS region transcription start site region 135864
D15Jmp11 15 89349297 to 89349493 196 DNA segment DNA segment, Chr 15, Jackson Laboratory Mapping Panels 11
Lmf2 15 89351004 to 89355659 4655 - protein coding gene lipase maturation factor 2
Cpgi7540 15 89355203 to 89356050 847 CpG island CpG island 7540
Tssr135865 15 89355468 to 89355498 30 - TSS region transcription start site region 135865
Tssr135866 15 89355529 to 89355632 103 - TSS region transcription start site region 135866
Tssr135867 15 89355655 to 89355668 13 - TSS region transcription start site region 135867
Tssr132660 15 89355716 to 89355727 11 + TSS region transcription start site region 132660
Ncaph2 15 89355719 to 89372826 17107 + protein coding gene non-SMC condensin II complex, subunit H2
Tssr132661 15 89355730 to 89355741 11 + TSS region transcription start site region 132661
Tssr132662 15 89355755 to 89355782 27 + TSS region transcription start site region 132662
Tssr135868 15 89356451 to 89356458 7 - TSS region transcription start site region 135868
Tssr132663 15 89370526 to 89370543 17 + TSS region transcription start site region 132663
Sco2 15 89371637 to 89373818 2181 - protein coding gene SCO2 cytochrome c oxidase assembly protein
Tymp 15 89371931 to 89377036 5105 - protein coding gene thymidine phosphorylase
Cpgi7541 15 89373331 to 89374434 1103 CpG island CpG island 7541
4930423K06Rik 15 89373625 to 89375717 2092 unclassified non-coding RNA gene RIKEN cDNA 4930423K06 gene
Tssr135869 15 89373810 to 89373829 19 - TSS region transcription start site region 135869
Tssr135870 15 89373831 to 89373860 29 - TSS region transcription start site region 135870
Tssr135871 15 89373865 to 89373901 36 - TSS region transcription start site region 135871
Tssr132664 15 89373903 to 89373928 25 + TSS region transcription start site region 132664
Tssr132665 15 89373934 to 89373961 27 + TSS region transcription start site region 132665
Tssr135872 15 89374008 to 89374030 22 - TSS region transcription start site region 135872
Tssr135873 15 89374039 to 89374074 35 - TSS region transcription start site region 135873
Tssr135874 15 89374083 to 89374145 62 - TSS region transcription start site region 135874
Tssr132666 15 89376342 to 89376364 22 + TSS region transcription start site region 132666