Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:87528933-88719118

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35471 15 87529906 to 87543945 14039 - lncRNA gene predicted gene, 35471
Cpgi7506 15 87543611 to 87545316 1705 CpG island CpG island 7506
Tssr132594 15 87544188 to 87544262 74 + TSS region transcription start site region 132594
Tssr132595 15 87544286 to 87544304 18 + TSS region transcription start site region 132595
Tafa5 15 87544299 to 87759364 215065 + protein coding gene TAFA chemokine like family member 5
Cpgi7507 15 87623650 to 87626040 2390 CpG island CpG island 7507
Tssr132596 15 87624258 to 87624291 33 + TSS region transcription start site region 132596
Tssr132597 15 87624296 to 87624309 13 + TSS region transcription start site region 132597
Tssr132598 15 87625098 to 87625106 8 + TSS region transcription start site region 132598
Tssr132599 15 87625214 to 87625230 16 + TSS region transcription start site region 132599
Tssr132600 15 87625245 to 87625261 16 + TSS region transcription start site region 132600
Tssr132601 15 87632077 to 87632085 8 + TSS region transcription start site region 132601
Tssr132602 15 87652039 to 87652049 10 + TSS region transcription start site region 132602
Tssr132603 15 87654936 to 87654945 9 + TSS region transcription start site region 132603
Tssr132604 15 87654972 to 87654981 9 + TSS region transcription start site region 132604
Tssr132605 15 87655003 to 87655019 16 + TSS region transcription start site region 132605
Tssr132606 15 87655028 to 87655035 7 + TSS region transcription start site region 132606
Tssr132607 15 87715542 to 87715569 27 + TSS region transcription start site region 132607
Tssr132608 15 87715592 to 87715614 22 + TSS region transcription start site region 132608
Mir6393 15 87795850 to 87795943 93 - miRNA gene microRNA 6393
Gm35599 15 87803896 to 87945043 141147 + lncRNA gene predicted gene, 35599
Gm35711 15 87814502 to 87828943 14441 + lncRNA gene predicted gene, 35711
Gm35652 15 87830088 to 87835239 5151 + lncRNA gene predicted gene, 35652
Gm38626 15 87835234 to 87837725 2491 + lncRNA gene predicted gene, 38626
Lfibq10 15 87957884 to 90043083 2085199 QTL liver fibrosis QTL 10
Gm49472 15 87967416 to 87988517 21101 + lincRNA gene predicted gene, 49472
D15Mit170 15 88061255 to 88061375 120 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 170
Gm35772 15 88073744 to 88074878 1134 + lincRNA gene predicted gene, 35772
Cpgi7508 15 88123933 to 88124118 185 CpG island CpG island 7508
Tssr135807 15 88124430 to 88124431 1 - TSS region transcription start site region 135807
Gm41376 15 88215214 to 88217999 2785 - lncRNA gene predicted gene, 41376
4930445N06Rik 15 88268082 to 88315632 47550 - lincRNA gene RIKEN cDNA 4930445N06 gene
B230214G05Rik 15 88314874 to 88372651 57777 + lincRNA gene RIKEN cDNA B230214G05 gene
Tssr135808 15 88315627 to 88315637 10 - TSS region transcription start site region 135808
Cpgi7509 15 88400355 to 88400590 235 CpG island CpG island 7509
Gm35831 15 88421232 to 88514419 93187 - lncRNA gene predicted gene, 35831
Tssr135809 15 88600206 to 88600213 7 - TSS region transcription start site region 135809
Tssr132609 15 88600280 to 88600332 52 + TSS region transcription start site region 132609
Zdhhc25 15 88600302 to 88601669 1367 + protein coding gene zinc finger, DHHC domain containing 25
Cpgi7510 15 88600587 to 88600741 154 CpG island CpG island 7510
n-TMcat4 15 88641532 to 88641604 72 + tRNA gene nuclear encoded tRNA methionine 4 (anticodon CAT)
Gm35997 15 88656461 to 88662615 6154 - lncRNA gene predicted gene, 35997
Cpgi7511 15 88658446 to 88658648 202 CpG island CpG island 7511
Brd1 15 88687034 to 88734226 47192 - protein coding gene bromodomain containing 1
Tssr135810 15 88687985 to 88687989 4 - TSS region transcription start site region 135810
Tssr135811 15 88706403 to 88706431 28 - TSS region transcription start site region 135811
Tssr135812 15 88708345 to 88708362 17 - TSS region transcription start site region 135812
Tssr132610 15 88708464 to 88708483 19 + TSS region transcription start site region 132610
Tssr132611 15 88710147 to 88710160 13 + TSS region transcription start site region 132611
D15Ertd55e 15 88710924 to 88711156 232 DNA segment DNA segment, Chr 15, ERATO Doi 55, expressed