Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:8689484-9140303

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
In(15Rictor;Slc1a3)1Ove 15 6708379 to 8710764 2002385 chromosomal inversion inversion, Chr 15, Paul A Overbeek 1
Slc1a3 15 8634124 to 8710764 76640 - protein coding gene solute carrier family 1 (glial high affinity glutamate transporter), member 3
Cpgi6937 15 8710193 to 8710643 450 CpG island CpG island 6937
Tssr133679 15 8710444 to 8710498 54 - TSS region transcription start site region 133679
Tssr133680 15 8710734 to 8710760 26 - TSS region transcription start site region 133680
Gm31340 15 8711026 to 8864483 153457 + lncRNA gene predicted gene, 31340
Tssr130599 15 8832279 to 8832293 14 + TSS region transcription start site region 130599
Tssr130600 15 8832321 to 8832333 12 + TSS region transcription start site region 130600
Tssr130601 15 8838067 to 8838082 15 + TSS region transcription start site region 130601
Tssr130602 15 8914095 to 8914115 20 + TSS region transcription start site region 130602
Gm5043 15 8914484 to 8915303 819 + pseudogene predicted gene 5043
Gm5210 15 8917798 to 8929171 11373 - pseudogene predicted gene 5210
Tssr130603 15 8967929 to 8967936 7 + TSS region transcription start site region 130603
Tssr130604 15 8967943 to 8967960 17 + TSS region transcription start site region 130604
Ranbp3l 15 8967949 to 9067335 99386 + protein coding gene RAN binding protein 3-like
Tssr130605 15 8967963 to 8967982 19 + TSS region transcription start site region 130605
Tssr130606 15 8967996 to 8968011 15 + TSS region transcription start site region 130606
Tssr130607 15 8968288 to 8968293 5 + TSS region transcription start site region 130607
Tssr130608 15 8968319 to 8968368 49 + TSS region transcription start site region 130608
Tssr130609 15 8968389 to 8968392 3 + TSS region transcription start site region 130609
A430110A21Rik 15 8993330 to 8994478 1148 unclassified gene RIKEN cDNA A430110A21 gene
Gm46511 15 9009205 to 9012856 3651 - lncRNA gene predicted gene, 46511
Cpgi6938 15 9062941 to 9063115 174 CpG island CpG island 6938
Cpgi6939 15 9070750 to 9072328 1578 CpG island CpG island 6939
Tssr130610 15 9071252 to 9071273 21 + TSS region transcription start site region 130610
Nadk2 15 9071260 to 9110496 39236 + protein coding gene NAD kinase 2, mitochondrial
Tssr130611 15 9071289 to 9071304 15 + TSS region transcription start site region 130611
Tssr130612 15 9071327 to 9071340 13 + TSS region transcription start site region 130612
Tssr130613 15 9071393 to 9071471 78 + TSS region transcription start site region 130613
Tssr130614 15 9071612 to 9071621 9 + TSS region transcription start site region 130614
Tssr130615 15 9071624 to 9071635 11 + TSS region transcription start site region 130615
Tssr130616 15 9071649 to 9071724 75 + TSS region transcription start site region 130616
Tssr130617 15 9072921 to 9072964 43 + TSS region transcription start site region 130617
Tssr130618 15 9073024 to 9073038 14 + TSS region transcription start site region 130618
Tssr130619 15 9073183 to 9073187 4 + TSS region transcription start site region 130619
Tssr130620 15 9092205 to 9092213 8 + TSS region transcription start site region 130620
Tssr130621 15 9092224 to 9092234 10 + TSS region transcription start site region 130621
Tssr130622 15 9092239 to 9092243 4 + TSS region transcription start site region 130622
Skp2 15 9111985 to 9155425 43440 - protein coding gene S-phase kinase-associated protein 2 (p45)
Tssr133681 15 9136119 to 9136123 4 - TSS region transcription start site region 133681
Cpgi6940 15 9140238 to 9141202 964 CpG island CpG island 6940