Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:86870003-88440019

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pitm5 15 83079860 to 87170187 4090327 QTL prion incubation time 5
Gm35284 15 86902013 to 86904459 2446 + lncRNA gene predicted gene, 35284
Gm49466 15 86923637 to 86924082 445 - lincRNA gene predicted gene, 49466
Gm49467 15 86939107 to 86939496 389 + pseudogene predicted gene, 49467
Gm49468 15 86990519 to 86991308 789 + lincRNA gene predicted gene, 49468
Gm23416 15 87068993 to 87069087 94 + miRNA gene predicted gene, 23416
Gm49469 15 87097532 to 87100177 2645 + lincRNA gene predicted gene, 49469
Gm49470 15 87139086 to 87179926 40840 + lincRNA gene predicted gene, 49470
n-R5s42 15 87169113 to 87169216 103 + rRNA gene nuclear encoded rRNA 5S 42
D15Mit241 15 87170085 to 87170187 102 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 241
A930027H12Rik 15 87243840 to 87253979 10139 + lincRNA gene RIKEN cDNA A930027H12 gene
D15Mit216 15 87276743 to 87276914 171 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 216
D15Mit262 15 87280611 to 87280733 122 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 262
Tssr132593 15 87327231 to 87327233 2 + TSS region transcription start site region 132593
Tssr4686 15 87342063 to 87342066 3 + TSS region transcription start site region 4686
Gm35422 15 87454022 to 87469667 15645 - lncRNA gene predicted gene, 35422
Sluc26 15 87461452 to 87461591 139 QTL susceptibility to lung cancer 26
D15Mit96 15 87461452 to 87461591 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 96
Dbsty4 15 87465070 to 87465215 145 QTL diabesity 4
Alprf 15 87465070 to 90390365 2925295 QTL alcohol preference
D15Mit159 15 87465070 to 87465215 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 159
Pitm4 15 87465070 to 87465215 145 QTL prion incubation time 4
Gm35471 15 87529906 to 87543945 14039 - lncRNA gene predicted gene, 35471
Cpgi7506 15 87543611 to 87545316 1705 CpG island CpG island 7506
Tssr132594 15 87544188 to 87544262 74 + TSS region transcription start site region 132594
Tssr132595 15 87544286 to 87544304 18 + TSS region transcription start site region 132595
Tafa5 15 87544299 to 87759364 215065 + protein coding gene TAFA chemokine like family member 5
Cpgi7507 15 87623650 to 87626040 2390 CpG island CpG island 7507
Tssr132596 15 87624258 to 87624291 33 + TSS region transcription start site region 132596
Tssr132597 15 87624296 to 87624309 13 + TSS region transcription start site region 132597
Tssr132598 15 87625098 to 87625106 8 + TSS region transcription start site region 132598
Tssr132599 15 87625214 to 87625230 16 + TSS region transcription start site region 132599
Tssr132600 15 87625245 to 87625261 16 + TSS region transcription start site region 132600
Tssr132601 15 87632077 to 87632085 8 + TSS region transcription start site region 132601
Tssr132602 15 87652039 to 87652049 10 + TSS region transcription start site region 132602
Tssr132603 15 87654936 to 87654945 9 + TSS region transcription start site region 132603
Tssr132604 15 87654972 to 87654981 9 + TSS region transcription start site region 132604
Tssr132605 15 87655003 to 87655019 16 + TSS region transcription start site region 132605
Tssr132606 15 87655028 to 87655035 7 + TSS region transcription start site region 132606
Tssr132607 15 87715542 to 87715569 27 + TSS region transcription start site region 132607
Tssr132608 15 87715592 to 87715614 22 + TSS region transcription start site region 132608
Mir6393 15 87795850 to 87795943 93 - miRNA gene microRNA 6393
Gm35599 15 87803896 to 87945043 141147 + lncRNA gene predicted gene, 35599
Gm35711 15 87814502 to 87828943 14441 + lncRNA gene predicted gene, 35711
Gm35652 15 87830088 to 87835239 5151 + lncRNA gene predicted gene, 35652
Gm38626 15 87835234 to 87837725 2491 + lncRNA gene predicted gene, 38626
Lfibq10 15 87957884 to 90043083 2085199 QTL liver fibrosis QTL 10
Gm49472 15 87967416 to 87988517 21101 + lincRNA gene predicted gene, 49472
D15Mit170 15 88061255 to 88061375 120 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 170
Gm35772 15 88073744 to 88074878 1134 + lincRNA gene predicted gene, 35772
Cpgi7508 15 88123933 to 88124118 185 CpG island CpG island 7508
Tssr135807 15 88124430 to 88124431 1 - TSS region transcription start site region 135807
Gm41376 15 88215214 to 88217999 2785 - lncRNA gene predicted gene, 41376
4930445N06Rik 15 88268082 to 88315632 47550 - lincRNA gene RIKEN cDNA 4930445N06 gene
B230214G05Rik 15 88314874 to 88372651 57777 + lincRNA gene RIKEN cDNA B230214G05 gene
Tssr135808 15 88315627 to 88315637 10 - TSS region transcription start site region 135808
Cpgi7509 15 88400355 to 88400590 235 CpG island CpG island 7509
Gm35831 15 88421232 to 88514419 93187 - lncRNA gene predicted gene, 35831