Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:86647532-87550177

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pitm5 15 83079860 to 87170187 4090327 QTL prion incubation time 5
Gm35118 15 86692414 to 86705167 12753 - lncRNA gene predicted gene, 35118
Tssr132592 15 86704160 to 86704174 14 + TSS region transcription start site region 132592
Gm49464 15 86704291 to 86711545 7254 + lincRNA gene predicted gene, 49464
Tssr135805 15 86706411 to 86706424 13 - TSS region transcription start site region 135805
Tssr135806 15 86706436 to 86706447 11 - TSS region transcription start site region 135806
Gm49465 15 86726495 to 86726759 264 + pseudogene predicted gene, 49465
4930543I03Rik 15 86737826 to 86766140 28314 + lincRNA gene RIKEN cDNA 4930543I03 gene
Gm35284 15 86902013 to 86904459 2446 + lncRNA gene predicted gene, 35284
Gm49466 15 86923637 to 86924082 445 - lincRNA gene predicted gene, 49466
Gm49467 15 86939107 to 86939496 389 + pseudogene predicted gene, 49467
Gm49468 15 86990519 to 86991308 789 + lincRNA gene predicted gene, 49468
Gm23416 15 87068993 to 87069087 94 + miRNA gene predicted gene, 23416
Gm49469 15 87097532 to 87100177 2645 + lincRNA gene predicted gene, 49469
Gm49470 15 87139086 to 87179926 40840 + lincRNA gene predicted gene, 49470
n-R5s42 15 87169113 to 87169216 103 + rRNA gene nuclear encoded rRNA 5S 42
D15Mit241 15 87170085 to 87170187 102 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 241
A930027H12Rik 15 87243840 to 87253979 10139 + lincRNA gene RIKEN cDNA A930027H12 gene
D15Mit216 15 87276743 to 87276914 171 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 216
D15Mit262 15 87280611 to 87280733 122 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 262
Tssr132593 15 87327231 to 87327233 2 + TSS region transcription start site region 132593
Tssr4686 15 87342063 to 87342066 3 + TSS region transcription start site region 4686
Gm35422 15 87454022 to 87469667 15645 - lncRNA gene predicted gene, 35422
Sluc26 15 87461452 to 87461591 139 QTL susceptibility to lung cancer 26
D15Mit96 15 87461452 to 87461591 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 96
D15Mit159 15 87465070 to 87465215 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 159
Dbsty4 15 87465070 to 87465215 145 QTL diabesity 4
Pitm4 15 87465070 to 87465215 145 QTL prion incubation time 4
Alprf 15 87465070 to 90390365 2925295 QTL alcohol preference
Gm35471 15 87529906 to 87543945 14039 - lncRNA gene predicted gene, 35471
Cpgi7506 15 87543611 to 87545316 1705 CpG island CpG island 7506
Tssr132594 15 87544188 to 87544262 74 + TSS region transcription start site region 132594
Tssr132595 15 87544286 to 87544304 18 + TSS region transcription start site region 132595
Tafa5 15 87544299 to 87759364 215065 + protein coding gene TAFA chemokine like family member 5