Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:86489107-87389496

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pitm5 15 83079860 to 87170187 4090327 QTL prion incubation time 5
Tbc1d22a 15 86214459 to 86498503 284044 + protein coding gene TBC1 domain family, member 22a
Tssr135803 15 86574448 to 86574457 9 - TSS region transcription start site region 135803
Tssr135804 15 86574491 to 86574499 8 - TSS region transcription start site region 135804
D15Mit37 15 86597220 to 86597367 147 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 37
Gm34965 15 86604929 to 86605632 703 + lncRNA gene predicted gene, 34965
Gm35118 15 86692414 to 86705167 12753 - lncRNA gene predicted gene, 35118
Tssr132592 15 86704160 to 86704174 14 + TSS region transcription start site region 132592
Gm49464 15 86704291 to 86711545 7254 + lincRNA gene predicted gene, 49464
Tssr135805 15 86706411 to 86706424 13 - TSS region transcription start site region 135805
Tssr135806 15 86706436 to 86706447 11 - TSS region transcription start site region 135806
Gm49465 15 86726495 to 86726759 264 + pseudogene predicted gene, 49465
4930543I03Rik 15 86737826 to 86766140 28314 + lincRNA gene RIKEN cDNA 4930543I03 gene
Gm35284 15 86902013 to 86904459 2446 + lncRNA gene predicted gene, 35284
Gm49466 15 86923637 to 86924082 445 - lincRNA gene predicted gene, 49466
Gm49467 15 86939107 to 86939496 389 + pseudogene predicted gene, 49467
Gm49468 15 86990519 to 86991308 789 + lincRNA gene predicted gene, 49468
Gm23416 15 87068993 to 87069087 94 + miRNA gene predicted gene, 23416
Gm49469 15 87097532 to 87100177 2645 + lincRNA gene predicted gene, 49469
Gm49470 15 87139086 to 87179926 40840 + lincRNA gene predicted gene, 49470
n-R5s42 15 87169113 to 87169216 103 + rRNA gene nuclear encoded rRNA 5S 42
D15Mit241 15 87170085 to 87170187 102 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 241
A930027H12Rik 15 87243840 to 87253979 10139 + lincRNA gene RIKEN cDNA A930027H12 gene
D15Mit216 15 87276743 to 87276914 171 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 216
D15Mit262 15 87280611 to 87280733 122 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 262
Tssr132593 15 87327231 to 87327233 2 + TSS region transcription start site region 132593
Tssr4686 15 87342063 to 87342066 3 + TSS region transcription start site region 4686