Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:85854177-86214208

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttc38 15 85832306 to 85858822 26516 + protein coding gene tetratricopeptide repeat domain 38
Cpgi7496 15 85859414 to 85860116 702 CpG island CpG island 7496
Tssr132555 15 85859656 to 85859679 23 + TSS region transcription start site region 132555
Tssr132556 15 85859689 to 85859744 55 + TSS region transcription start site region 132556
Gtse1 15 85859745 to 85876573 16828 + protein coding gene G two S phase expressed protein 1
Tssr132557 15 85859752 to 85859775 23 + TSS region transcription start site region 132557
Tssr132558 15 85859961 to 85860013 52 + TSS region transcription start site region 132558
Tssr132559 15 85860014 to 85860057 43 + TSS region transcription start site region 132559
Gm49548 15 85877647 to 85879090 1443 - bidirectional promoter lncRNA gene predicted gene, 49548
Cpgi7497 15 85878670 to 85879822 1152 CpG island CpG island 7497
Tssr132560 15 85879306 to 85879372 66 + TSS region transcription start site region 132560
Trmu 15 85879312 to 85897394 18082 + protein coding gene tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
4833417J16Rik 15 85886110 to 85887237 1127 unclassified gene RIKEN cDNA 4833417J16 gene
Celsr1 15 85898929 to 86033777 134848 - protein coding gene cadherin, EGF LAG seven-pass G-type receptor 1
Tssr135771 15 85963517 to 85963523 6 - TSS region transcription start site region 135771
Tssr132561 15 86004298 to 86004338 40 + TSS region transcription start site region 132561
Tssr135772 15 86004985 to 86004989 4 - TSS region transcription start site region 135772
Tssr135773 15 86019797 to 86019801 4 - TSS region transcription start site region 135773
Tssr135774 15 86021467 to 86021480 13 - TSS region transcription start site region 135774
Tssr135775 15 86029961 to 86029994 33 - TSS region transcription start site region 135775
Cpgi7498 15 86031951 to 86035004 3053 CpG island CpG island 7498
Tssr135776 15 86034016 to 86034027 11 - TSS region transcription start site region 135776
Tssr135777 15 86034043 to 86034106 63 - TSS region transcription start site region 135777
Tssr135778 15 86034177 to 86034208 31 - TSS region transcription start site region 135778
Gm34764 15 86034250 to 86040244 5994 + lncRNA gene predicted gene, 34764
Tssr132562 15 86036503 to 86036511 8 + TSS region transcription start site region 132562
Tssr135779 15 86051280 to 86051305 25 - TSS region transcription start site region 135779
Gm41375 15 86053567 to 86058620 5053 - lncRNA gene predicted gene, 41375
Gramd4 15 86057695 to 86137634 79939 + protein coding gene GRAM domain containing 4
Cpgi7499 15 86057951 to 86059582 1631 CpG island CpG island 7499
Tssr135780 15 86058575 to 86058591 16 - TSS region transcription start site region 135780
Tssr132563 15 86058746 to 86058793 47 + TSS region transcription start site region 132563
Tssr132564 15 86058796 to 86058851 55 + TSS region transcription start site region 132564
Tssr135781 15 86067458 to 86067484 26 - TSS region transcription start site region 135781
Tssr132565 15 86067706 to 86067744 38 + TSS region transcription start site region 132565
Tssr132566 15 86067816 to 86067853 37 + TSS region transcription start site region 132566
Tssr132567 15 86074791 to 86074810 19 + TSS region transcription start site region 132567
Gm15722 15 86087640 to 86090060 2420 - antisense lncRNA gene predicted gene 15722
Cpgi7500 15 86135480 to 86135632 152 CpG island CpG island 7500
Cerk 15 86139128 to 86186141 47013 - protein coding gene ceramide kinase
Tssr135782 15 86141348 to 86141386 38 - TSS region transcription start site region 135782
Gm24011 15 86149584 to 86149851 267 + unclassified non-coding RNA gene predicted gene, 24011
Tssr135783 15 86150565 to 86150570 5 - TSS region transcription start site region 135783
Tssr135784 15 86160426 to 86160437 11 - TSS region transcription start site region 135784
Tssr135785 15 86160526 to 86160542 16 - TSS region transcription start site region 135785
Cpgi7501 15 86164879 to 86165159 280 CpG island CpG island 7501
Tssr135786 15 86168245 to 86168269 24 - TSS region transcription start site region 135786
Tssr132568 15 86168467 to 86168510 43 + TSS region transcription start site region 132568
Tssr135787 15 86169829 to 86169842 13 - TSS region transcription start site region 135787
Tssr132569 15 86169931 to 86169954 23 + TSS region transcription start site region 132569
Tssr132570 15 86182120 to 86182139 19 + TSS region transcription start site region 132570
Tssr132571 15 86182815 to 86182850 35 + TSS region transcription start site region 132571
Tssr132572 15 86182904 to 86182916 12 + TSS region transcription start site region 132572
Cpgi7502 15 86184790 to 86186311 1521 CpG island CpG island 7502
Tssr135788 15 86185660 to 86185671 11 - TSS region transcription start site region 135788
Tssr135789 15 86185679 to 86185766 87 - TSS region transcription start site region 135789
Gm15569 15 86185728 to 86187152 1424 + antisense lncRNA gene predicted gene 15569
Tssr135790 15 86185862 to 86185937 75 - TSS region transcription start site region 135790
Tssr135791 15 86186002 to 86186027 25 - TSS region transcription start site region 135791
Tssr135792 15 86186032 to 86186057 25 - TSS region transcription start site region 135792
Tssr135793 15 86186136 to 86186185 49 - TSS region transcription start site region 135793
Tssr135794 15 86186313 to 86186354 41 - TSS region transcription start site region 135794
Tssr135795 15 86186919 to 86186926 7 - TSS region transcription start site region 135795
Cpgi7503 15 86194723 to 86194875 152 CpG island CpG island 7503
Tssr132573 15 86194736 to 86194773 37 + TSS region transcription start site region 132573
Tssr132574 15 86194822 to 86194854 32 + TSS region transcription start site region 132574
Tssr132575 15 86194876 to 86194895 19 + TSS region transcription start site region 132575
Tssr132576 15 86194898 to 86194909 11 + TSS region transcription start site region 132576
Tssr132577 15 86195091 to 86195116 25 + TSS region transcription start site region 132577
Tssr135796 15 86202696 to 86202722 26 - TSS region transcription start site region 135796
Tssr132578 15 86202818 to 86202834 16 + TSS region transcription start site region 132578
Cpgi7504 15 86204429 to 86204675 246 CpG island CpG island 7504
Gm22818 15 86212554 to 86212657 103 - snRNA gene predicted gene, 22818
2810001A02Rik 15 86213735 to 86214388 653 unclassified non-coding RNA gene RIKEN cDNA 2810001A02 gene
Cpgi7505 15 86213799 to 86215073 1274 CpG island CpG island 7505