Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:85782647-85974090

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppara 15 85734983 to 85802819 67836 + protein coding gene peroxisome proliferator activated receptor alpha
Tssr132548 15 85787169 to 85787177 8 + TSS region transcription start site region 132548
Tssr135764 15 85790193 to 85790203 10 - TSS region transcription start site region 135764
Tssr132549 15 85804045 to 85804060 15 + TSS region transcription start site region 132549
Cdpf1 15 85806972 to 85811697 4725 - protein coding gene cysteine rich, DPF motif domain containing 1
Tssr135765 15 85809233 to 85809245 12 - TSS region transcription start site region 135765
Cpgi7492 15 85811051 to 85811996 945 CpG island CpG island 7492
Tssr135766 15 85811239 to 85811248 9 - TSS region transcription start site region 135766
Tssr132550 15 85811299 to 85811318 19 + TSS region transcription start site region 132550
Tssr132551 15 85811323 to 85811334 11 + TSS region transcription start site region 132551
Tssr132552 15 85811348 to 85811353 5 + TSS region transcription start site region 132552
Tssr135767 15 85811617 to 85811628 11 - TSS region transcription start site region 135767
Tssr135768 15 85811663 to 85811705 42 - TSS region transcription start site region 135768
Pkdrej 15 85814676 to 85821733 7057 - protein coding gene polycystin (PKD) family receptor for egg jelly
Cpgi7493 15 85821107 to 85822142 1035 CpG island CpG island 7493
Tssr135769 15 85821472 to 85821514 42 - TSS region transcription start site region 135769
Tssr135770 15 85821787 to 85821801 14 - TSS region transcription start site region 135770
Cpgi7494 15 85832066 to 85832622 556 CpG island CpG island 7494
Tssr132553 15 85832301 to 85832317 16 + TSS region transcription start site region 132553
Ttc38 15 85832306 to 85858822 26516 + protein coding gene tetratricopeptide repeat domain 38
Tssr132554 15 85832319 to 85832351 32 + TSS region transcription start site region 132554
Cpgi7495 15 85851193 to 85851373 180 CpG island CpG island 7495
Cpgi7496 15 85859414 to 85860116 702 CpG island CpG island 7496
Tssr132555 15 85859656 to 85859679 23 + TSS region transcription start site region 132555
Tssr132556 15 85859689 to 85859744 55 + TSS region transcription start site region 132556
Gtse1 15 85859745 to 85876573 16828 + protein coding gene G two S phase expressed protein 1
Tssr132557 15 85859752 to 85859775 23 + TSS region transcription start site region 132557
Tssr132558 15 85859961 to 85860013 52 + TSS region transcription start site region 132558
Tssr132559 15 85860014 to 85860057 43 + TSS region transcription start site region 132559
Gm49548 15 85877647 to 85879090 1443 - bidirectional promoter lncRNA gene predicted gene, 49548
Cpgi7497 15 85878670 to 85879822 1152 CpG island CpG island 7497
Tssr132560 15 85879306 to 85879372 66 + TSS region transcription start site region 132560
Trmu 15 85879312 to 85897394 18082 + protein coding gene tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
4833417J16Rik 15 85886110 to 85887237 1127 unclassified gene RIKEN cDNA 4833417J16 gene
Celsr1 15 85898929 to 86033777 134848 - protein coding gene cadherin, EGF LAG seven-pass G-type receptor 1
Tssr135771 15 85963517 to 85963523 6 - TSS region transcription start site region 135771