Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Pitm5 | 15 | 4090327 | QTL | prion incubation time 5 | ||
Lncppara | 15 | 3751 | + | lncRNA gene | long noncoding RNA near Ppara | |
Tssr135762 | 15 | 2 | - | TSS region | transcription start site region 135762 | |
Mirlet7c-2 | 15 | 94 | + | miRNA gene | microRNA let7c-2 | |
Mirc31 | 15 | 800 | complex/cluster/region | microRNA cluster 31, including Mirlet7c-2 through Mirlet7b | ||
Mirlet7b | 15 | 84 | + | miRNA gene | microRNA let7b | |
Gm34622 | 15 | 4501 | - | lncRNA gene | predicted gene, 34622 | |
Tssr135763 | 15 | 7 | - | TSS region | transcription start site region 135763 | |
Tssr132536 | 15 | 24 | + | TSS region | transcription start site region 132536 | |
Gm46529 | 15 | 6691 | + | lncRNA gene | predicted gene, 46529 | |
Cpgi7491 | 15 | 1917 | CpG island | CpG island 7491 | ||
Tssr132537 | 15 | 17 | + | TSS region | transcription start site region 132537 | |
Ppara | 15 | 67836 | + | protein coding gene | peroxisome proliferator activated receptor alpha | |
Tssr132538 | 15 | 31 | + | TSS region | transcription start site region 132538 | |
Tssr132539 | 15 | 29 | + | TSS region | transcription start site region 132539 | |
Tssr132540 | 15 | 54 | + | TSS region | transcription start site region 132540 | |
Tssr132541 | 15 | 12 | + | TSS region | transcription start site region 132541 | |
Tssr132542 | 15 | 15 | + | TSS region | transcription start site region 132542 | |
Tssr132543 | 15 | 11 | + | TSS region | transcription start site region 132543 | |
Tssr132544 | 15 | 19 | + | TSS region | transcription start site region 132544 | |
Tssr132545 | 15 | 20 | + | TSS region | transcription start site region 132545 | |
Tssr132546 | 15 | 17 | + | TSS region | transcription start site region 132546 | |
Tssr132547 | 15 | 25 | + | TSS region | transcription start site region 132547 | |
Tssr4684 | 15 | 8 | + | TSS region | transcription start site region 4684 | |
Tssr132548 | 15 | 8 | + | TSS region | transcription start site region 132548 | |
Tssr135764 | 15 | 10 | - | TSS region | transcription start site region 135764 | |
Tssr132549 | 15 | 15 | + | TSS region | transcription start site region 132549 | |
Cdpf1 | 15 | 4725 | - | protein coding gene | cysteine rich, DPF motif domain containing 1 | |
Tssr135765 | 15 | 12 | - | TSS region | transcription start site region 135765 | |
Cpgi7492 | 15 | 945 | CpG island | CpG island 7492 | ||
Tssr135766 | 15 | 9 | - | TSS region | transcription start site region 135766 | |
Tssr132550 | 15 | 19 | + | TSS region | transcription start site region 132550 | |
Tssr132551 | 15 | 11 | + | TSS region | transcription start site region 132551 | |
Tssr132552 | 15 | 5 | + | TSS region | transcription start site region 132552 | |
Tssr135767 | 15 | 11 | - | TSS region | transcription start site region 135767 | |
Tssr135768 | 15 | 42 | - | TSS region | transcription start site region 135768 | |
Pkdrej | 15 | 7057 | - | protein coding gene | polycystin (PKD) family receptor for egg jelly | |
Cpgi7493 | 15 | 1035 | CpG island | CpG island 7493 | ||
Tssr135769 | 15 | 42 | - | TSS region | transcription start site region 135769 | |
Tssr135770 | 15 | 14 | - | TSS region | transcription start site region 135770 | |
Cpgi7494 | 15 | 556 | CpG island | CpG island 7494 | ||
Tssr132553 | 15 | 16 | + | TSS region | transcription start site region 132553 | |
Ttc38 | 15 | 26516 | + | protein coding gene | tetratricopeptide repeat domain 38 | |
Tssr132554 | 15 | 32 | + | TSS region | transcription start site region 132554 | |
Cpgi7495 | 15 | 180 | CpG island | CpG island 7495 | ||
Cpgi7496 | 15 | 702 | CpG island | CpG island 7496 | ||
Tssr132555 | 15 | 23 | + | TSS region | transcription start site region 132555 | |
Tssr132556 | 15 | 55 | + | TSS region | transcription start site region 132556 | |
Gtse1 | 15 | 16828 | + | protein coding gene | G two S phase expressed protein 1 | |
Tssr132557 | 15 | 23 | + | TSS region | transcription start site region 132557 | |
Tssr132558 | 15 | 52 | + | TSS region | transcription start site region 132558 | |
Tssr132559 | 15 | 43 | + | TSS region | transcription start site region 132559 | |
Gm49548 | 15 | 1443 | - | bidirectional promoter lncRNA gene | predicted gene, 49548 | |
Cpgi7497 | 15 | 1152 | CpG island | CpG island 7497 | ||
Tssr132560 | 15 | 66 | + | TSS region | transcription start site region 132560 | |
Trmu | 15 | 18082 | + | protein coding gene | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase | |
4833417J16Rik | 15 | 1127 | unclassified gene | RIKEN cDNA 4833417J16 gene | ||
Celsr1 | 15 | 134848 | - | protein coding gene | cadherin, EGF LAG seven-pass G-type receptor 1 | |
Tssr135771 | 15 | 6 | - | TSS region | transcription start site region 135771 | |
Tssr132561 | 15 | 40 | + | TSS region | transcription start site region 132561 | |
Tssr135772 | 15 | 4 | - | TSS region | transcription start site region 135772 | |
Tssr135773 | 15 | 4 | - | TSS region | transcription start site region 135773 | |
Tssr135774 | 15 | 13 | - | TSS region | transcription start site region 135774 | |
Tssr135775 | 15 | 33 | - | TSS region | transcription start site region 135775 | |
Cpgi7498 | 15 | 3053 | CpG island | CpG island 7498 | ||
Tssr135776 | 15 | 11 | - | TSS region | transcription start site region 135776 | |
Tssr135777 | 15 | 63 | - | TSS region | transcription start site region 135777 | |
Tssr135778 | 15 | 31 | - | TSS region | transcription start site region 135778 | |
Gm34764 | 15 | 5994 | + | lncRNA gene | predicted gene, 34764 | |
Tssr132562 | 15 | 8 | + | TSS region | transcription start site region 132562 | |
Tssr135779 | 15 | 25 | - | TSS region | transcription start site region 135779 | |
Gm41375 | 15 | 5053 | - | lncRNA gene | predicted gene, 41375 | |
Gramd4 | 15 | 79939 | + | protein coding gene | GRAM domain containing 4 | |
Cpgi7499 | 15 | 1631 | CpG island | CpG island 7499 | ||
Tssr135780 | 15 | 16 | - | TSS region | transcription start site region 135780 | |
Tssr132563 | 15 | 47 | + | TSS region | transcription start site region 132563 | |
Tssr132564 | 15 | 55 | + | TSS region | transcription start site region 132564 | |
Tssr135781 | 15 | 26 | - | TSS region | transcription start site region 135781 | |
Tssr132565 | 15 | 38 | + | TSS region | transcription start site region 132565 | |
Tssr132566 | 15 | 37 | + | TSS region | transcription start site region 132566 | |
Tssr132567 | 15 | 19 | + | TSS region | transcription start site region 132567 | |
Gm15722 | 15 | 2420 | - | antisense lncRNA gene | predicted gene 15722 | |
Cpgi7500 | 15 | 152 | CpG island | CpG island 7500 | ||
Cerk | 15 | 47013 | - | protein coding gene | ceramide kinase | |
Tssr135782 | 15 | 38 | - | TSS region | transcription start site region 135782 | |
Gm24011 | 15 | 267 | + | unclassified non-coding RNA gene | predicted gene, 24011 | |
Tssr135783 | 15 | 5 | - | TSS region | transcription start site region 135783 | |
Tssr135784 | 15 | 11 | - | TSS region | transcription start site region 135784 | |
Tssr135785 | 15 | 16 | - | TSS region | transcription start site region 135785 | |
Cpgi7501 | 15 | 280 | CpG island | CpG island 7501 | ||
Tssr135786 | 15 | 24 | - | TSS region | transcription start site region 135786 | |
Tssr132568 | 15 | 43 | + | TSS region | transcription start site region 132568 | |
Tssr135787 | 15 | 13 | - | TSS region | transcription start site region 135787 | |
Tssr132569 | 15 | 23 | + | TSS region | transcription start site region 132569 | |
Tssr132570 | 15 | 19 | + | TSS region | transcription start site region 132570 | |
Tssr132571 | 15 | 35 | + | TSS region | transcription start site region 132571 | |
Tssr132572 | 15 | 12 | + | TSS region | transcription start site region 132572 | |
Cpgi7502 | 15 | 1521 | CpG island | CpG island 7502 | ||
Tssr135788 | 15 | 11 | - | TSS region | transcription start site region 135788 | |
Tssr135789 | 15 | 87 | - | TSS region | transcription start site region 135789 | |
Gm15569 | 15 | 1424 | + | antisense lncRNA gene | predicted gene 15569 | |
Tssr135790 | 15 | 75 | - | TSS region | transcription start site region 135790 | |
Tssr135791 | 15 | 25 | - | TSS region | transcription start site region 135791 | |
Tssr135792 | 15 | 25 | - | TSS region | transcription start site region 135792 | |
Tssr135793 | 15 | 49 | - | TSS region | transcription start site region 135793 | |
Tssr135794 | 15 | 41 | - | TSS region | transcription start site region 135794 | |
Tssr135795 | 15 | 7 | - | TSS region | transcription start site region 135795 | |
Cpgi7503 | 15 | 152 | CpG island | CpG island 7503 | ||
Tssr132573 | 15 | 37 | + | TSS region | transcription start site region 132573 | |
Tssr132574 | 15 | 32 | + | TSS region | transcription start site region 132574 | |
Tssr132575 | 15 | 19 | + | TSS region | transcription start site region 132575 | |
Tssr132576 | 15 | 11 | + | TSS region | transcription start site region 132576 | |
Tssr132577 | 15 | 25 | + | TSS region | transcription start site region 132577 | |
Tssr135796 | 15 | 26 | - | TSS region | transcription start site region 135796 | |
Tssr132578 | 15 | 16 | + | TSS region | transcription start site region 132578 | |
Cpgi7504 | 15 | 246 | CpG island | CpG island 7504 | ||
Gm22818 | 15 | 103 | - | snRNA gene | predicted gene, 22818 | |
2810001A02Rik | 15 | 653 | unclassified non-coding RNA gene | RIKEN cDNA 2810001A02 gene | ||
Cpgi7505 | 15 | 1274 | CpG island | CpG island 7505 | ||
Tssr135797 | 15 | 11 | - | TSS region | transcription start site region 135797 | |
Tssr135798 | 15 | 19 | - | TSS region | transcription start site region 135798 | |
Tssr135799 | 15 | 60 | - | TSS region | transcription start site region 135799 | |
Tssr132579 | 15 | 24 | + | TSS region | transcription start site region 132579 | |
Tbc1d22a | 15 | 284044 | + | protein coding gene | TBC1 domain family, member 22a | |
Tssr132580 | 15 | 11 | + | TSS region | transcription start site region 132580 | |
Tssr135800 | 15 | 7 | - | TSS region | transcription start site region 135800 | |
Tssr4685 | 15 | 21 | + | TSS region | transcription start site region 4685 | |
Tssr132581 | 15 | 13 | + | TSS region | transcription start site region 132581 | |
Tssr132582 | 15 | 46 | + | TSS region | transcription start site region 132582 | |
Tssr132583 | 15 | 21 | + | TSS region | transcription start site region 132583 | |
Tssr132584 | 15 | 9 | + | TSS region | transcription start site region 132584 | |
Tssr132585 | 15 | 12 | + | TSS region | transcription start site region 132585 | |
Tssr132586 | 15 | 12 | + | TSS region | transcription start site region 132586 | |
Tssr132587 | 15 | 14 | + | TSS region | transcription start site region 132587 | |
Tssr132588 | 15 | 37 | + | TSS region | transcription start site region 132588 | |
D15Ertd320e | 15 | 203 | DNA segment | DNA segment, Chr 15, ERATO Doi 320, expressed | ||
Tssr135801 | 15 | 4 | - | TSS region | transcription start site region 135801 | |
Tssr132589 | 15 | 4 | + | TSS region | transcription start site region 132589 | |
Tssr132590 | 15 | 7 | + | TSS region | transcription start site region 132590 | |
A930001M01Rik | 15 | 21746 | - | antisense lncRNA gene | RIKEN cDNA A930001M01 gene | |
Tssr132591 | 15 | 1 | + | TSS region | transcription start site region 132591 | |
Tssr135802 | 15 | 17 | - | TSS region | transcription start site region 135802 | |
Tssr135803 | 15 | 9 | - | TSS region | transcription start site region 135803 | |
Tssr135804 | 15 | 8 | - | TSS region | transcription start site region 135804 | |
D15Mit37 | 15 | 147 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 37 | ||
Gm34965 | 15 | 703 | + | lncRNA gene | predicted gene, 34965 | |
Gm35118 | 15 | 12753 | - | lncRNA gene | predicted gene, 35118 | |
Tssr132592 | 15 | 14 | + | TSS region | transcription start site region 132592 | |
Gm49464 | 15 | 7254 | + | lincRNA gene | predicted gene, 49464 | |
Tssr135805 | 15 | 13 | - | TSS region | transcription start site region 135805 | |
Tssr135806 | 15 | 11 | - | TSS region | transcription start site region 135806 | |
Gm49465 | 15 | 264 | + | pseudogene | predicted gene, 49465 | |
4930543I03Rik | 15 | 28314 | + | lincRNA gene | RIKEN cDNA 4930543I03 gene | |
Gm35284 | 15 | 2446 | + | lncRNA gene | predicted gene, 35284 | |
Gm49466 | 15 | 445 | - | lincRNA gene | predicted gene, 49466 | |
Gm49467 | 15 | 389 | + | pseudogene | predicted gene, 49467 | |
Gm49468 | 15 | 789 | + | lincRNA gene | predicted gene, 49468 | |
Gm23416 | 15 | 94 | + | miRNA gene | predicted gene, 23416 | |
Gm49469 | 15 | 2645 | + | lincRNA gene | predicted gene, 49469 | |
Gm49470 | 15 | 40840 | + | lincRNA gene | predicted gene, 49470 | |
n-R5s42 | 15 | 103 | + | rRNA gene | nuclear encoded rRNA 5S 42 | |
D15Mit241 | 15 | 102 | DNA segment | DNA Segment, Chr 15, Massachusetts Institute of Technology 241 | ||
A930027H12Rik | 15 | 10139 | + | lincRNA gene | RIKEN cDNA A930027H12 gene | |
D15Mit216 | 15 | 171 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 216 | ||
D15Mit262 | 15 | 122 | DNA segment | DNA Segment, Chr 15 Massachusetts Institute of Technology 262 | ||
Tssr132593 | 15 | 2 | + | TSS region | transcription start site region 132593 | |
Tssr4686 | 15 | 3 | + | TSS region | transcription start site region 4686 | |
Gm35422 | 15 | 15645 | - | lncRNA gene | predicted gene, 35422 | |
D15Mit96 | 15 | 139 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 96 | ||
Sluc26 | 15 | 139 | QTL | susceptibility to lung cancer 26 | ||
Pitm4 | 15 | 145 | QTL | prion incubation time 4 | ||
Dbsty4 | 15 | 145 | QTL | diabesity 4 | ||
Alprf | 15 | 2925295 | QTL | alcohol preference | ||
D15Mit159 | 15 | 145 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 159 | ||
Gm35471 | 15 | 14039 | - | lncRNA gene | predicted gene, 35471 | |
Cpgi7506 | 15 | 1705 | CpG island | CpG island 7506 | ||
Tssr132594 | 15 | 74 | + | TSS region | transcription start site region 132594 | |
Tssr132595 | 15 | 18 | + | TSS region | transcription start site region 132595 | |
Tafa5 | 15 | 215065 | + | protein coding gene | TAFA chemokine like family member 5 | |
Cpgi7507 | 15 | 2390 | CpG island | CpG island 7507 | ||
Tssr132596 | 15 | 33 | + | TSS region | transcription start site region 132596 | |
Tssr132597 | 15 | 13 | + | TSS region | transcription start site region 132597 | |
Tssr132598 | 15 | 8 | + | TSS region | transcription start site region 132598 | |
Tssr132599 | 15 | 16 | + | TSS region | transcription start site region 132599 | |
Tssr132600 | 15 | 16 | + | TSS region | transcription start site region 132600 | |
Tssr132601 | 15 | 8 | + | TSS region | transcription start site region 132601 | |
Tssr132602 | 15 | 10 | + | TSS region | transcription start site region 132602 | |
Tssr132603 | 15 | 9 | + | TSS region | transcription start site region 132603 | |
Tssr132604 | 15 | 9 | + | TSS region | transcription start site region 132604 | |
Tssr132605 | 15 | 16 | + | TSS region | transcription start site region 132605 | |
Tssr132606 | 15 | 7 | + | TSS region | transcription start site region 132606 | |
Tssr132607 | 15 | 27 | + | TSS region | transcription start site region 132607 | |
Tssr132608 | 15 | 22 | + | TSS region | transcription start site region 132608 | |
Mir6393 | 15 | 93 | - | miRNA gene | microRNA 6393 | |
Gm35599 | 15 | 141147 | + | lncRNA gene | predicted gene, 35599 | |
Gm35711 | 15 | 14441 | + | lncRNA gene | predicted gene, 35711 | |
Gm35652 | 15 | 5151 | + | lncRNA gene | predicted gene, 35652 | |
Gm38626 | 15 | 2491 | + | lncRNA gene | predicted gene, 38626 | |
Lfibq10 | 15 | 2085199 | QTL | liver fibrosis QTL 10 | ||
Gm49472 | 15 | 21101 | + | lincRNA gene | predicted gene, 49472 |