Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:85641603-85771697

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr132525 15 85645689 to 85645713 24 + TSS region transcription start site region 132525
Cpgi7486 15 85645975 to 85646327 352 CpG island CpG island 7486
Tssr132526 15 85646079 to 85646127 48 + TSS region transcription start site region 132526
Gm49539 15 85646083 to 85667675 21592 + lincRNA gene predicted gene, 49539
Cpgi7487 15 85653442 to 85653922 480 CpG island CpG island 7487
Tssr132527 15 85653550 to 85653604 54 + TSS region transcription start site region 132527
Tssr135761 15 85653878 to 85653912 34 - TSS region transcription start site region 135761
Tssr132528 15 85654697 to 85654699 2 + TSS region transcription start site region 132528
Cpgi7488 15 85660727 to 85661097 370 CpG island CpG island 7488
Cpgi7489 15 85669817 to 85672350 2533 CpG island CpG island 7489
Tssr132529 15 85670993 to 85671019 26 + TSS region transcription start site region 132529
Tssr132530 15 85671260 to 85671279 19 + TSS region transcription start site region 132530
Tssr132531 15 85671474 to 85671511 37 + TSS region transcription start site region 132531
Tssr132532 15 85671519 to 85671533 14 + TSS region transcription start site region 132532
Tssr132533 15 85671809 to 85671816 7 + TSS region transcription start site region 132533
Tssr132534 15 85671825 to 85671837 12 + TSS region transcription start site region 132534
A130088B03Rik 15 85676741 to 85680834 4093 unclassified gene RIKEN cDNA A130088B03 gene
Cpgi7490 15 85678435 to 85678605 170 CpG island CpG island 7490
Tssr132535 15 85679461 to 85679486 25 + TSS region transcription start site region 132535
Lncppara 15 85703773 to 85707524 3751 + lncRNA gene long noncoding RNA near Ppara
Tssr135762 15 85703982 to 85703984 2 - TSS region transcription start site region 135762
Mirc31 15 85706603 to 85707403 800 complex/cluster/region microRNA cluster 31, including Mirlet7c-2 through Mirlet7b
Mirlet7c-2 15 85706603 to 85706697 94 + miRNA gene microRNA let7c-2
Mirlet7b 15 85707319 to 85707403 84 + miRNA gene microRNA let7b
Gm34622 15 85708844 to 85713345 4501 - lncRNA gene predicted gene, 34622
Tssr135763 15 85711605 to 85711612 7 - TSS region transcription start site region 135763
Tssr132536 15 85723825 to 85723849 24 + TSS region transcription start site region 132536
Gm46529 15 85723850 to 85730541 6691 + lncRNA gene predicted gene, 46529
Cpgi7491 15 85734485 to 85736402 1917 CpG island CpG island 7491
Tssr132537 15 85734908 to 85734925 17 + TSS region transcription start site region 132537
Ppara 15 85734983 to 85802819 67836 + protein coding gene peroxisome proliferator activated receptor alpha
Tssr132538 15 85735584 to 85735615 31 + TSS region transcription start site region 132538
Tssr132539 15 85735621 to 85735650 29 + TSS region transcription start site region 132539
Tssr132540 15 85735754 to 85735808 54 + TSS region transcription start site region 132540
Tssr132541 15 85735811 to 85735823 12 + TSS region transcription start site region 132541
Tssr132542 15 85736107 to 85736122 15 + TSS region transcription start site region 132542
Tssr132543 15 85736341 to 85736352 11 + TSS region transcription start site region 132543
Tssr132544 15 85736799 to 85736818 19 + TSS region transcription start site region 132544
Tssr132545 15 85746879 to 85746899 20 + TSS region transcription start site region 132545