Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:85377736-85618227

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atxn10 15 85336245 to 85463212 126967 + protein coding gene ataxin 10
Tssr132515 15 85393434 to 85393450 16 + TSS region transcription start site region 132515
Tssr132516 15 85402096 to 85402121 25 + TSS region transcription start site region 132516
Tssr135754 15 85409192 to 85409218 26 - TSS region transcription start site region 135754
A930031G03Rik 15 85417985 to 85418943 958 unclassified gene RIKEN cDNA A930031G03 gene
Tssr132517 15 85418120 to 85418125 5 + TSS region transcription start site region 132517
Tssr132518 15 85462125 to 85462170 45 + TSS region transcription start site region 132518
Tssr132519 15 85462740 to 85462741 1 + TSS region transcription start site region 132519
7530416G11Rik 15 85492736 to 85503227 10491 - protein coding gene RIKEN cDNA 7530416G11 gene
Tssr132520 15 85503905 to 85503923 18 + TSS region transcription start site region 132520
Cpgi7478 15 85507635 to 85507814 179 CpG island CpG island 7478
Gm4825 15 85510812 to 85511219 407 + pseudogene predicted pseudogene 4825
Wnt7b 15 85535437 to 85581821 46384 - protein coding gene wingless-type MMTV integration site family, member 7B
Cpgi7479 15 85537199 to 85537836 637 CpG island CpG island 7479
Cpgi7480 15 85558911 to 85559070 159 CpG island CpG island 7480
Gm34394 15 85565767 to 85580244 14477 + lncRNA gene predicted gene, 34394
Cpgi7481 15 85576220 to 85578353 2133 CpG island CpG island 7481
Tssr135755 15 85577869 to 85577902 33 - TSS region transcription start site region 135755
Tssr135756 15 85578119 to 85578132 13 - TSS region transcription start site region 135756
Tssr135757 15 85578136 to 85578154 18 - TSS region transcription start site region 135757
Cpgi7482 15 85580111 to 85582538 2427 CpG island CpG island 7482
Tssr4682 15 85580145 to 85580150 5 + TSS region transcription start site region 4682
Tssr132521 15 85580178 to 85580190 12 + TSS region transcription start site region 132521
AU022754 15 85581142 to 85593708 12566 + antisense lncRNA gene expressed sequence AU022754
Tssr135758 15 85581809 to 85581820 11 - TSS region transcription start site region 135758
Tssr4683 15 85581825 to 85581832 7 - TSS region transcription start site region 4683
Tssr135759 15 85581836 to 85581913 77 - TSS region transcription start site region 135759
Tssr135760 15 85581927 to 85581949 22 - TSS region transcription start site region 135760
Cpgi7483 15 85615031 to 85615871 840 CpG island CpG island 7483