Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:8521026-9054483

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
In(15Rictor;Slc1a3)1Ove 15 6708379 to 8710764 2002385 chromosomal inversion inversion, Chr 15, Paul A Overbeek 1
Gm49249 15 8512327 to 8532794 20467 + lincRNA gene predicted gene, 49249
Gm2348 15 8529135 to 8529434 299 - pseudogene predicted pseudogene 2348
Gm49250 15 8529435 to 8529591 156 - pseudogene predicted gene, 49250
Cpgi6935 15 8568782 to 8569743 961 CpG island CpG island 6935
Tssr130598 15 8569964 to 8569979 15 + TSS region transcription start site region 130598
D15Mit224 15 8576710 to 8576826 116 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 224
Gm46508 15 8582643 to 8593341 10698 + lncRNA gene predicted gene, 46508
Tssr133671 15 8602008 to 8602009 1 - TSS region transcription start site region 133671
AA589642 15 8605450 to 8605851 401 unclassified gene expressed sequence AA589642
Cpgi6936 15 8629620 to 8629906 286 CpG island CpG island 6936
Slc1a3 15 8634124 to 8710764 76640 - protein coding gene solute carrier family 1 (glial high affinity glutamate transporter), member 3
Tssr133672 15 8634861 to 8634884 23 - TSS region transcription start site region 133672
Tssr133673 15 8635267 to 8635278 11 - TSS region transcription start site region 133673
Tssr133674 15 8636033 to 8636039 6 - TSS region transcription start site region 133674
Tssr133675 15 8639189 to 8639190 1 - TSS region transcription start site region 133675
Tssr133676 15 8642281 to 8642292 11 - TSS region transcription start site region 133676
Tssr133677 15 8643223 to 8643231 8 - TSS region transcription start site region 133677
Gm37310 15 8652106 to 8655073 2967 - unclassified gene predicted gene, 37310
E130014H10Rik 15 8664965 to 8667234 2269 unclassified gene RIKEN cDNA E130014H10 gene
Tssr133678 15 8683613 to 8683616 3 - TSS region transcription start site region 133678
Cpgi6937 15 8710193 to 8710643 450 CpG island CpG island 6937
Tssr133679 15 8710444 to 8710498 54 - TSS region transcription start site region 133679
Tssr133680 15 8710734 to 8710760 26 - TSS region transcription start site region 133680
Gm31340 15 8711026 to 8864483 153457 + lncRNA gene predicted gene, 31340
Tssr130599 15 8832279 to 8832293 14 + TSS region transcription start site region 130599
Tssr130600 15 8832321 to 8832333 12 + TSS region transcription start site region 130600
Tssr130601 15 8838067 to 8838082 15 + TSS region transcription start site region 130601
Tssr130602 15 8914095 to 8914115 20 + TSS region transcription start site region 130602
Gm5043 15 8914484 to 8915303 819 + pseudogene predicted gene 5043
Gm5210 15 8917798 to 8929171 11373 - pseudogene predicted gene 5210
Tssr130603 15 8967929 to 8967936 7 + TSS region transcription start site region 130603
Tssr130604 15 8967943 to 8967960 17 + TSS region transcription start site region 130604
Ranbp3l 15 8967949 to 9067335 99386 + protein coding gene RAN binding protein 3-like
Tssr130605 15 8967963 to 8967982 19 + TSS region transcription start site region 130605
Tssr130606 15 8967996 to 8968011 15 + TSS region transcription start site region 130606
Tssr130607 15 8968288 to 8968293 5 + TSS region transcription start site region 130607
Tssr130608 15 8968319 to 8968368 49 + TSS region transcription start site region 130608
Tssr130609 15 8968389 to 8968392 3 + TSS region transcription start site region 130609
A430110A21Rik 15 8993330 to 8994478 1148 unclassified gene RIKEN cDNA A430110A21 gene
Gm46511 15 9009205 to 9012856 3651 - lncRNA gene predicted gene, 46511