Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:85061581-85564180

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam118a 15 85028948 to 85062830 33882 + protein coding gene family with sequence similarity 118, member A
Smc1b 15 85064689 to 85131957 67268 - protein coding gene structural maintenance of chromosomes 1B
Tssr135749 15 85106966 to 85107013 47 - TSS region transcription start site region 135749
Gm10923 15 85116870 to 85117287 417 + pseudogene predicted gene 10923
Tssr4680 15 85121814 to 85121818 4 - TSS region transcription start site region 4680
Tssr135750 15 85127828 to 85127869 41 - TSS region transcription start site region 135750
Cpgi7475 15 85131337 to 85132359 1022 CpG island CpG island 7475
Tssr135751 15 85131949 to 85131987 38 - TSS region transcription start site region 135751
Tssr132494 15 85132061 to 85132078 17 + TSS region transcription start site region 132494
Ribc2 15 85132078 to 85144570 12492 + protein coding gene RIB43A domain with coiled-coils 2
Tssr132495 15 85132080 to 85132121 41 + TSS region transcription start site region 132495
Tssr132496 15 85132138 to 85132143 5 + TSS region transcription start site region 132496
Gm19277 15 85149254 to 85156132 6878 - lincRNA gene predicted gene, 19277
Tssr135752 15 85156126 to 85156137 11 - TSS region transcription start site region 135752
Tssr132497 15 85177739 to 85177762 23 + TSS region transcription start site region 132497
Cpgi7476 15 85205778 to 85206505 727 CpG island CpG island 7476
Fbln1 15 85205942 to 85286294 80352 + protein coding gene fibulin 1
Tssr132498 15 85206022 to 85206045 23 + TSS region transcription start site region 132498
Tssr132499 15 85206046 to 85206072 26 + TSS region transcription start site region 132499
Tssr132500 15 85228859 to 85228873 14 + TSS region transcription start site region 132500
Tssr132501 15 85231478 to 85231496 18 + TSS region transcription start site region 132501
Tssr132502 15 85232554 to 85232580 26 + TSS region transcription start site region 132502
Tssr132503 15 85238500 to 85238529 29 + TSS region transcription start site region 132503
Tssr132504 15 85239319 to 85239330 11 + TSS region transcription start site region 132504
Tssr132505 15 85242034 to 85242049 15 + TSS region transcription start site region 132505
Gm34337 15 85311581 to 85314180 2599 - lncRNA gene predicted gene, 34337
Tssr132506 15 85329369 to 85329382 13 + TSS region transcription start site region 132506
Tssr135753 15 85332631 to 85332638 7 - TSS region transcription start site region 135753
Cpgi7477 15 85336004 to 85337041 1037 CpG island CpG island 7477
Tssr132507 15 85336221 to 85336232 11 + TSS region transcription start site region 132507
Tssr132508 15 85336237 to 85336278 41 + TSS region transcription start site region 132508
Atxn10 15 85336245 to 85463212 126967 + protein coding gene ataxin 10
Tssr132509 15 85336287 to 85336303 16 + TSS region transcription start site region 132509
Tssr132510 15 85336337 to 85336344 7 + TSS region transcription start site region 132510
Tssr132511 15 85336350 to 85336387 37 + TSS region transcription start site region 132511
Tssr132512 15 85336401 to 85336417 16 + TSS region transcription start site region 132512
Tssr132513 15 85336444 to 85336460 16 + TSS region transcription start site region 132513
Gm23517 15 85351063 to 85351254 191 - snRNA gene predicted gene, 23517
Tssr4681 15 85354250 to 85354252 2 - TSS region transcription start site region 4681
Tssr132514 15 85354318 to 85354320 2 + TSS region transcription start site region 132514
Tssr132515 15 85393434 to 85393450 16 + TSS region transcription start site region 132515
Tssr132516 15 85402096 to 85402121 25 + TSS region transcription start site region 132516
Tssr135754 15 85409192 to 85409218 26 - TSS region transcription start site region 135754
A930031G03Rik 15 85417985 to 85418943 958 unclassified gene RIKEN cDNA A930031G03 gene
Tssr132517 15 85418120 to 85418125 5 + TSS region transcription start site region 132517
Tssr132518 15 85462125 to 85462170 45 + TSS region transcription start site region 132518
Tssr132519 15 85462740 to 85462741 1 + TSS region transcription start site region 132519
7530416G11Rik 15 85492736 to 85503227 10491 - protein coding gene RIKEN cDNA 7530416G11 gene
Tssr132520 15 85503905 to 85503923 18 + TSS region transcription start site region 132520
Cpgi7478 15 85507635 to 85507814 179 CpG island CpG island 7478
Gm4825 15 85510812 to 85511219 407 + pseudogene predicted pseudogene 4825
Wnt7b 15 85535437 to 85581821 46384 - protein coding gene wingless-type MMTV integration site family, member 7B
Cpgi7479 15 85537199 to 85537836 637 CpG island CpG island 7479
Cpgi7480 15 85558911 to 85559070 159 CpG island CpG island 7480