Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Pitm5 | 15 | 4090327 | QTL | prion incubation time 5 | ||
Nup50 | 15 | 19535 | + | protein coding gene | nucleoporin 50 | |
5031439G07Rik | 15 | 42251 | - | protein coding gene | RIKEN cDNA 5031439G07 gene | |
Tssr135738 | 15 | 61 | - | TSS region | transcription start site region 135738 | |
Tssr135739 | 15 | 18 | - | TSS region | transcription start site region 135739 | |
Mir1249 | 15 | 97 | - | miRNA gene | microRNA 1249 | |
Tssr135740 | 15 | 28 | - | TSS region | transcription start site region 135740 | |
Tssr135741 | 15 | 16 | - | TSS region | transcription start site region 135741 | |
Cpgi7471 | 15 | 1353 | CpG island | CpG island 7471 | ||
Tssr4677 | 15 | 3 | - | TSS region | transcription start site region 4677 | |
Tssr4678 | 15 | 3 | - | TSS region | transcription start site region 4678 | |
Tssr135742 | 15 | 60 | - | TSS region | transcription start site region 135742 | |
Tssr132483 | 15 | 24 | + | TSS region | transcription start site region 132483 | |
Tssr135743 | 15 | 9 | - | TSS region | transcription start site region 135743 | |
Gm39558 | 15 | 18168 | + | lncRNA gene | predicted gene, 39558 | |
Cpgi7472 | 15 | 233 | CpG island | CpG island 7472 | ||
Tssr132484 | 15 | 1 | + | TSS region | transcription start site region 132484 | |
Gm6847 | 15 | 861 | + | pseudogene | predicted gene 6847 | |
Gm49523 | 15 | 627 | - | pseudogene | predicted gene, 49523 | |
Cpgi7473 | 15 | 183 | CpG island | CpG island 7473 | ||
Tssr4679 | 15 | 1 | + | TSS region | transcription start site region 4679 | |
Tssr132485 | 15 | 3 | + | TSS region | transcription start site region 132485 | |
Upk3a | 15 | 5406 | + | protein coding gene | uroplakin 3A | |
Tssr132486 | 15 | 37 | + | TSS region | transcription start site region 132486 | |
Tssr132487 | 15 | 5 | + | TSS region | transcription start site region 132487 | |
Tssr132488 | 15 | 14 | + | TSS region | transcription start site region 132488 | |
Fam118a | 15 | 33882 | + | protein coding gene | family with sequence similarity 118, member A | |
Cpgi7474 | 15 | 1280 | CpG island | CpG island 7474 | ||
Tssr135744 | 15 | 14 | - | TSS region | transcription start site region 135744 | |
Tssr135745 | 15 | 21 | - | TSS region | transcription start site region 135745 | |
Tssr132489 | 15 | 64 | + | TSS region | transcription start site region 132489 | |
Tssr132490 | 15 | 13 | + | TSS region | transcription start site region 132490 | |
Tssr132491 | 15 | 50 | + | TSS region | transcription start site region 132491 | |
Tssr135746 | 15 | 7 | - | TSS region | transcription start site region 135746 | |
Tssr135747 | 15 | 7 | - | TSS region | transcription start site region 135747 | |
Tssr135748 | 15 | 10 | - | TSS region | transcription start site region 135748 | |
Tssr132492 | 15 | 19 | + | TSS region | transcription start site region 132492 | |
Tssr132493 | 15 | 30 | + | TSS region | transcription start site region 132493 | |
Smc1b | 15 | 67268 | - | protein coding gene | structural maintenance of chromosomes 1B | |
Tssr135749 | 15 | 47 | - | TSS region | transcription start site region 135749 | |
Gm10923 | 15 | 417 | + | pseudogene | predicted gene 10923 | |
Tssr4680 | 15 | 4 | - | TSS region | transcription start site region 4680 | |
Tssr135750 | 15 | 41 | - | TSS region | transcription start site region 135750 | |
Cpgi7475 | 15 | 1022 | CpG island | CpG island 7475 | ||
Tssr135751 | 15 | 38 | - | TSS region | transcription start site region 135751 | |
Tssr132494 | 15 | 17 | + | TSS region | transcription start site region 132494 | |
Ribc2 | 15 | 12492 | + | protein coding gene | RIB43A domain with coiled-coils 2 | |
Tssr132495 | 15 | 41 | + | TSS region | transcription start site region 132495 | |
Tssr132496 | 15 | 5 | + | TSS region | transcription start site region 132496 | |
Gm19277 | 15 | 6878 | - | lincRNA gene | predicted gene, 19277 | |
Tssr135752 | 15 | 11 | - | TSS region | transcription start site region 135752 | |
Tssr132497 | 15 | 23 | + | TSS region | transcription start site region 132497 | |
Cpgi7476 | 15 | 727 | CpG island | CpG island 7476 | ||
Fbln1 | 15 | 80352 | + | protein coding gene | fibulin 1 | |
Tssr132498 | 15 | 23 | + | TSS region | transcription start site region 132498 | |
Tssr132499 | 15 | 26 | + | TSS region | transcription start site region 132499 | |
Tssr132500 | 15 | 14 | + | TSS region | transcription start site region 132500 | |
Tssr132501 | 15 | 18 | + | TSS region | transcription start site region 132501 | |
Tssr132502 | 15 | 26 | + | TSS region | transcription start site region 132502 | |
Tssr132503 | 15 | 29 | + | TSS region | transcription start site region 132503 | |
Tssr132504 | 15 | 11 | + | TSS region | transcription start site region 132504 | |
Tssr132505 | 15 | 15 | + | TSS region | transcription start site region 132505 | |
Gm34337 | 15 | 2599 | - | lncRNA gene | predicted gene, 34337 | |
Tssr132506 | 15 | 13 | + | TSS region | transcription start site region 132506 | |
Tssr135753 | 15 | 7 | - | TSS region | transcription start site region 135753 | |
Cpgi7477 | 15 | 1037 | CpG island | CpG island 7477 | ||
Tssr132507 | 15 | 11 | + | TSS region | transcription start site region 132507 | |
Tssr132508 | 15 | 41 | + | TSS region | transcription start site region 132508 | |
Atxn10 | 15 | 126967 | + | protein coding gene | ataxin 10 | |
Tssr132509 | 15 | 16 | + | TSS region | transcription start site region 132509 | |
Tssr132510 | 15 | 7 | + | TSS region | transcription start site region 132510 | |
Tssr132511 | 15 | 37 | + | TSS region | transcription start site region 132511 | |
Tssr132512 | 15 | 16 | + | TSS region | transcription start site region 132512 | |
Tssr132513 | 15 | 16 | + | TSS region | transcription start site region 132513 | |
Gm23517 | 15 | 191 | - | snRNA gene | predicted gene, 23517 | |
Tssr4681 | 15 | 2 | - | TSS region | transcription start site region 4681 | |
Tssr132514 | 15 | 2 | + | TSS region | transcription start site region 132514 | |
Tssr132515 | 15 | 16 | + | TSS region | transcription start site region 132515 | |
Tssr132516 | 15 | 25 | + | TSS region | transcription start site region 132516 | |
Tssr135754 | 15 | 26 | - | TSS region | transcription start site region 135754 | |
A930031G03Rik | 15 | 958 | unclassified gene | RIKEN cDNA A930031G03 gene | ||
Tssr132517 | 15 | 5 | + | TSS region | transcription start site region 132517 | |
Tssr132518 | 15 | 45 | + | TSS region | transcription start site region 132518 | |
Tssr132519 | 15 | 1 | + | TSS region | transcription start site region 132519 | |
7530416G11Rik | 15 | 10491 | - | protein coding gene | RIKEN cDNA 7530416G11 gene | |
Tssr132520 | 15 | 18 | + | TSS region | transcription start site region 132520 | |
Cpgi7478 | 15 | 179 | CpG island | CpG island 7478 | ||
Gm4825 | 15 | 407 | + | pseudogene | predicted pseudogene 4825 | |
Wnt7b | 15 | 46384 | - | protein coding gene | wingless-type MMTV integration site family, member 7B | |
Cpgi7479 | 15 | 637 | CpG island | CpG island 7479 | ||
Cpgi7480 | 15 | 159 | CpG island | CpG island 7480 | ||
Gm34394 | 15 | 14477 | + | lncRNA gene | predicted gene, 34394 | |
Cpgi7481 | 15 | 2133 | CpG island | CpG island 7481 | ||
Tssr135755 | 15 | 33 | - | TSS region | transcription start site region 135755 | |
Tssr135756 | 15 | 13 | - | TSS region | transcription start site region 135756 | |
Tssr135757 | 15 | 18 | - | TSS region | transcription start site region 135757 | |
Cpgi7482 | 15 | 2427 | CpG island | CpG island 7482 | ||
Tssr4682 | 15 | 5 | + | TSS region | transcription start site region 4682 | |
Tssr132521 | 15 | 12 | + | TSS region | transcription start site region 132521 | |
AU022754 | 15 | 12566 | + | antisense lncRNA gene | expressed sequence AU022754 | |
Tssr135758 | 15 | 11 | - | TSS region | transcription start site region 135758 | |
Tssr4683 | 15 | 7 | - | TSS region | transcription start site region 4683 | |
Tssr135759 | 15 | 77 | - | TSS region | transcription start site region 135759 | |
Tssr135760 | 15 | 22 | - | TSS region | transcription start site region 135760 | |
Cpgi7483 | 15 | 840 | CpG island | CpG island 7483 | ||
Cpgi7484 | 15 | 1111 | CpG island | CpG island 7484 | ||
Cpgi7485 | 15 | 812 | CpG island | CpG island 7485 | ||
Tssr132522 | 15 | 15 | + | TSS region | transcription start site region 132522 | |
Tssr132523 | 15 | 26 | + | TSS region | transcription start site region 132523 | |
Tssr132524 | 15 | 14 | + | TSS region | transcription start site region 132524 | |
Tssr132525 | 15 | 24 | + | TSS region | transcription start site region 132525 | |
Cpgi7486 | 15 | 352 | CpG island | CpG island 7486 | ||
Tssr132526 | 15 | 48 | + | TSS region | transcription start site region 132526 | |
Gm49539 | 15 | 21592 | + | lincRNA gene | predicted gene, 49539 | |
Cpgi7487 | 15 | 480 | CpG island | CpG island 7487 | ||
Tssr132527 | 15 | 54 | + | TSS region | transcription start site region 132527 | |
Tssr135761 | 15 | 34 | - | TSS region | transcription start site region 135761 | |
Tssr132528 | 15 | 2 | + | TSS region | transcription start site region 132528 | |
Cpgi7488 | 15 | 370 | CpG island | CpG island 7488 | ||
Cpgi7489 | 15 | 2533 | CpG island | CpG island 7489 | ||
Tssr132529 | 15 | 26 | + | TSS region | transcription start site region 132529 | |
Tssr132530 | 15 | 19 | + | TSS region | transcription start site region 132530 | |
Tssr132531 | 15 | 37 | + | TSS region | transcription start site region 132531 | |
Tssr132532 | 15 | 14 | + | TSS region | transcription start site region 132532 | |
Tssr132533 | 15 | 7 | + | TSS region | transcription start site region 132533 | |
Tssr132534 | 15 | 12 | + | TSS region | transcription start site region 132534 | |
A130088B03Rik | 15 | 4093 | unclassified gene | RIKEN cDNA A130088B03 gene | ||
Cpgi7490 | 15 | 170 | CpG island | CpG island 7490 | ||
Tssr132535 | 15 | 25 | + | TSS region | transcription start site region 132535 | |
Lncppara | 15 | 3751 | + | lncRNA gene | long noncoding RNA near Ppara | |
Tssr135762 | 15 | 2 | - | TSS region | transcription start site region 135762 | |
Mirc31 | 15 | 800 | complex/cluster/region | microRNA cluster 31, including Mirlet7c-2 through Mirlet7b | ||
Mirlet7c-2 | 15 | 94 | + | miRNA gene | microRNA let7c-2 | |
Mirlet7b | 15 | 84 | + | miRNA gene | microRNA let7b | |
Gm34622 | 15 | 4501 | - | lncRNA gene | predicted gene, 34622 | |
Tssr135763 | 15 | 7 | - | TSS region | transcription start site region 135763 | |
Tssr132536 | 15 | 24 | + | TSS region | transcription start site region 132536 | |
Gm46529 | 15 | 6691 | + | lncRNA gene | predicted gene, 46529 | |
Cpgi7491 | 15 | 1917 | CpG island | CpG island 7491 | ||
Tssr132537 | 15 | 17 | + | TSS region | transcription start site region 132537 | |
Ppara | 15 | 67836 | + | protein coding gene | peroxisome proliferator activated receptor alpha | |
Tssr132538 | 15 | 31 | + | TSS region | transcription start site region 132538 | |
Tssr132539 | 15 | 29 | + | TSS region | transcription start site region 132539 | |
Tssr132540 | 15 | 54 | + | TSS region | transcription start site region 132540 | |
Tssr132541 | 15 | 12 | + | TSS region | transcription start site region 132541 | |
Tssr132542 | 15 | 15 | + | TSS region | transcription start site region 132542 | |
Tssr132543 | 15 | 11 | + | TSS region | transcription start site region 132543 | |
Tssr132544 | 15 | 19 | + | TSS region | transcription start site region 132544 | |
Tssr132545 | 15 | 20 | + | TSS region | transcription start site region 132545 | |
Tssr132546 | 15 | 17 | + | TSS region | transcription start site region 132546 | |
Tssr132547 | 15 | 25 | + | TSS region | transcription start site region 132547 | |
Tssr4684 | 15 | 8 | + | TSS region | transcription start site region 4684 | |
Tssr132548 | 15 | 8 | + | TSS region | transcription start site region 132548 | |
Tssr135764 | 15 | 10 | - | TSS region | transcription start site region 135764 | |
Tssr132549 | 15 | 15 | + | TSS region | transcription start site region 132549 | |
Cdpf1 | 15 | 4725 | - | protein coding gene | cysteine rich, DPF motif domain containing 1 | |
Tssr135765 | 15 | 12 | - | TSS region | transcription start site region 135765 | |
Cpgi7492 | 15 | 945 | CpG island | CpG island 7492 | ||
Tssr135766 | 15 | 9 | - | TSS region | transcription start site region 135766 | |
Tssr132550 | 15 | 19 | + | TSS region | transcription start site region 132550 | |
Tssr132551 | 15 | 11 | + | TSS region | transcription start site region 132551 | |
Tssr132552 | 15 | 5 | + | TSS region | transcription start site region 132552 | |
Tssr135767 | 15 | 11 | - | TSS region | transcription start site region 135767 | |
Tssr135768 | 15 | 42 | - | TSS region | transcription start site region 135768 | |
Pkdrej | 15 | 7057 | - | protein coding gene | polycystin (PKD) family receptor for egg jelly | |
Cpgi7493 | 15 | 1035 | CpG island | CpG island 7493 | ||
Tssr135769 | 15 | 42 | - | TSS region | transcription start site region 135769 | |
Tssr135770 | 15 | 14 | - | TSS region | transcription start site region 135770 | |
Cpgi7494 | 15 | 556 | CpG island | CpG island 7494 | ||
Tssr132553 | 15 | 16 | + | TSS region | transcription start site region 132553 | |
Ttc38 | 15 | 26516 | + | protein coding gene | tetratricopeptide repeat domain 38 | |
Tssr132554 | 15 | 32 | + | TSS region | transcription start site region 132554 | |
Cpgi7495 | 15 | 180 | CpG island | CpG island 7495 | ||
Cpgi7496 | 15 | 702 | CpG island | CpG island 7496 | ||
Tssr132555 | 15 | 23 | + | TSS region | transcription start site region 132555 | |
Tssr132556 | 15 | 55 | + | TSS region | transcription start site region 132556 | |
Gtse1 | 15 | 16828 | + | protein coding gene | G two S phase expressed protein 1 | |
Tssr132557 | 15 | 23 | + | TSS region | transcription start site region 132557 | |
Tssr132558 | 15 | 52 | + | TSS region | transcription start site region 132558 | |
Tssr132559 | 15 | 43 | + | TSS region | transcription start site region 132559 | |
Gm49548 | 15 | 1443 | - | bidirectional promoter lncRNA gene | predicted gene, 49548 | |
Cpgi7497 | 15 | 1152 | CpG island | CpG island 7497 | ||
Tssr132560 | 15 | 66 | + | TSS region | transcription start site region 132560 | |
Trmu | 15 | 18082 | + | protein coding gene | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase | |
4833417J16Rik | 15 | 1127 | unclassified gene | RIKEN cDNA 4833417J16 gene | ||
Celsr1 | 15 | 134848 | - | protein coding gene | cadherin, EGF LAG seven-pass G-type receptor 1 | |
Tssr135771 | 15 | 6 | - | TSS region | transcription start site region 135771 | |
Tssr132561 | 15 | 40 | + | TSS region | transcription start site region 132561 | |
Tssr135772 | 15 | 4 | - | TSS region | transcription start site region 135772 | |
Tssr135773 | 15 | 4 | - | TSS region | transcription start site region 135773 | |
Tssr135774 | 15 | 13 | - | TSS region | transcription start site region 135774 | |
Tssr135775 | 15 | 33 | - | TSS region | transcription start site region 135775 | |
Cpgi7498 | 15 | 3053 | CpG island | CpG island 7498 | ||
Tssr135776 | 15 | 11 | - | TSS region | transcription start site region 135776 | |
Tssr135777 | 15 | 63 | - | TSS region | transcription start site region 135777 | |
Tssr135778 | 15 | 31 | - | TSS region | transcription start site region 135778 | |
Gm34764 | 15 | 5994 | + | lncRNA gene | predicted gene, 34764 | |
Tssr132562 | 15 | 8 | + | TSS region | transcription start site region 132562 | |
Tssr135779 | 15 | 25 | - | TSS region | transcription start site region 135779 | |
Gm41375 | 15 | 5053 | - | lncRNA gene | predicted gene, 41375 |