Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:84398398-84712823

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shisal1 15 84379203 to 84447097 67894 - protein coding gene shisa like 1
Tssr132465 15 84412670 to 84412671 1 + TSS region transcription start site region 132465
Gm46527 15 84430181 to 84441748 11567 + protein coding gene predicted gene, 46527
Tssr135716 15 84436295 to 84436298 3 - TSS region transcription start site region 135716
Tssr135717 15 84444288 to 84444315 27 - TSS region transcription start site region 135717
Tssr135718 15 84444319 to 84444330 11 - TSS region transcription start site region 135718
Gm33830 15 84444746 to 84463567 18821 + lncRNA gene predicted gene, 33830
Cpgi7460 15 84445775 to 84446749 974 CpG island CpG island 7460
Tssr132466 15 84446053 to 84446064 11 + TSS region transcription start site region 132466
Tssr135719 15 84446537 to 84446581 44 - TSS region transcription start site region 135719
Tssr135720 15 84447019 to 84447034 15 - TSS region transcription start site region 135720
Tssr135721 15 84447037 to 84447065 28 - TSS region transcription start site region 135721
Cpgi7461 15 84450615 to 84450886 271 CpG island CpG island 7461
Tssr135722 15 84482843 to 84482865 22 - TSS region transcription start site region 135722
Gm33966 15 84509318 to 84510600 1282 - lncRNA gene predicted gene, 33966
Gm34027 15 84538857 to 84550562 11705 + lncRNA gene predicted gene, 34027
Tssr132467 15 84538946 to 84538955 9 + TSS region transcription start site region 132467
Rtl6 15 84553398 to 84557823 4425 - protein coding gene retrotransposon Gag like 6
Cpgi7462 15 84556891 to 84557945 1054 CpG island CpG island 7462
Tssr135723 15 84557587 to 84557639 52 - TSS region transcription start site region 135723
Tssr135724 15 84557754 to 84557773 19 - TSS region transcription start site region 135724
Tssr135725 15 84557776 to 84557875 99 - TSS region transcription start site region 135725
Gm34095 15 84571730 to 84577117 5387 - lincRNA gene predicted gene, 34095
4933416A02Rik 15 84579523 to 84581440 1917 unclassified gene RIKEN cDNA 4933416A02 gene
Tssr132468 15 84616070 to 84616071 1 + TSS region transcription start site region 132468
Gm34201 15 84617422 to 84627439 10017 - lncRNA gene predicted gene, 34201
Cpgi7463 15 84663001 to 84663968 967 CpG island CpG island 7463
Tssr132469 15 84663188 to 84663234 46 + TSS region transcription start site region 132469
Tssr132470 15 84669565 to 84669609 44 + TSS region transcription start site region 132470
Prr5 15 84669620 to 84703673 34053 + protein coding gene proline rich 5 (renal)
Tssr132471 15 84669645 to 84669647 2 + TSS region transcription start site region 132471
Tssr132472 15 84672862 to 84672866 4 + TSS region transcription start site region 132472
Tssr135726 15 84675188 to 84675199 11 - TSS region transcription start site region 135726
Cpgi7464 15 84680564 to 84681975 1411 CpG island CpG island 7464
Tssr132473 15 84680974 to 84681044 70 + TSS region transcription start site region 132473
Gm41374 15 84708698 to 84713818 5120 - lncRNA gene predicted gene, 41374