Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:8408683-8629953

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nipbl 15 8290617 to 8444463 153846 - protein coding gene NIPBL cohesin loading factor
Tssr133662 15 8430748 to 8430761 13 - TSS region transcription start site region 133662
AW557046 15 8435112 to 8445863 10751 + protein coding gene expressed sequence AW557046
Tssr133663 15 8436656 to 8436660 4 - TSS region transcription start site region 133663
Cpgi6933 15 8443486 to 8445654 2168 CpG island CpG island 6933
Tssr130591 15 8443605 to 8443636 31 + TSS region transcription start site region 130591
Tssr133664 15 8444164 to 8444209 45 - TSS region transcription start site region 133664
Tssr133665 15 8444218 to 8444246 28 - TSS region transcription start site region 133665
Tssr133666 15 8444435 to 8444448 13 - TSS region transcription start site region 133666
Tssr133667 15 8444449 to 8444506 57 - TSS region transcription start site region 133667
Tssr133668 15 8444609 to 8444668 59 - TSS region transcription start site region 133668
Tssr130592 15 8444733 to 8444749 16 + TSS region transcription start site region 130592
Tssr4546 15 8444865 to 8444877 12 - TSS region transcription start site region 4546
Tssr130593 15 8444965 to 8444973 8 + TSS region transcription start site region 130593
Tssr130594 15 8445410 to 8445420 10 + TSS region transcription start site region 130594
Tssr130595 15 8445565 to 8445570 5 + TSS region transcription start site region 130595
Cpgi6934 15 8445981 to 8446220 239 CpG island CpG island 6934
Tssr130596 15 8446188 to 8446194 6 + TSS region transcription start site region 130596
Tssr133669 15 8465276 to 8465305 29 - TSS region transcription start site region 133669
Tssr133670 15 8465308 to 8465321 13 - TSS region transcription start site region 133670
Gm49247 15 8480871 to 8481945 1074 - lincRNA gene predicted gene, 49247
Gm31282 15 8482119 to 8500343 18224 + lincRNA gene predicted gene, 31282
D15Mit247 15 8501490 to 8501637 147 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-247
Tssr130597 15 8512112 to 8512140 28 + TSS region transcription start site region 130597
Gm49249 15 8512327 to 8532794 20467 + lincRNA gene predicted gene, 49249
Gm2310 15 8518683 to 8519953 1270 - protein coding gene predicted gene 2310
Gm2348 15 8529135 to 8529434 299 - pseudogene predicted pseudogene 2348
Gm49250 15 8529435 to 8529591 156 - pseudogene predicted gene, 49250
Cpgi6935 15 8568782 to 8569743 961 CpG island CpG island 6935
Tssr130598 15 8569964 to 8569979 15 + TSS region transcription start site region 130598
D15Mit224 15 8576710 to 8576826 116 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 224
Gm46508 15 8582643 to 8593341 10698 + lncRNA gene predicted gene, 46508
Tssr133671 15 8602008 to 8602009 1 - TSS region transcription start site region 133671
AA589642 15 8605450 to 8605851 401 unclassified gene expressed sequence AA589642
Cpgi6936 15 8629620 to 8629906 286 CpG island CpG island 6936