Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:84027357-84227366

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Efcab6 15 83866712 to 84065379 198667 - protein coding gene EF-hand calcium binding domain 6
Rpl31-ps22 15 84030339 to 84030675 336 + pseudogene ribosomal protein L31, pseudogene 22
Tssr135699 15 84055071 to 84055099 28 - TSS region transcription start site region 135699
Tssr135700 15 84055103 to 84055110 7 - TSS region transcription start site region 135700
4933433M23Rik 15 84055207 to 84056590 1383 unclassified gene RIKEN cDNA 4933433M23 gene
Cpgi7455 15 84064939 to 84065475 536 CpG island CpG island 7455
Tssr135701 15 84065329 to 84065364 35 - TSS region transcription start site region 135701
Sult4a1 15 84076097 to 84105754 29657 - protein coding gene sulfotransferase family 4A, member 1
Tssr135702 15 84090643 to 84090672 29 - TSS region transcription start site region 135702
Cpgi7456 15 84104668 to 84106139 1471 CpG island CpG island 7456
Tssr135703 15 84105599 to 84105658 59 - TSS region transcription start site region 135703
Tssr135704 15 84105662 to 84105674 12 - TSS region transcription start site region 135704
Gm46526 15 84106658 to 84108851 2193 + lincRNA gene predicted gene, 46526
Pnpla5 15 84112356 to 84123175 10819 - protein coding gene patatin-like phospholipase domain containing 5
Tssr132441 15 84123116 to 84123117 1 + TSS region transcription start site region 132441
Tssr135705 15 84123174 to 84123203 29 - TSS region transcription start site region 135705
Gm33432 15 84127278 to 84133211 5933 + lincRNA gene predicted gene, 33432
Tssr132442 15 84127300 to 84127320 20 + TSS region transcription start site region 132442
Tssr132443 15 84127323 to 84127334 11 + TSS region transcription start site region 132443
Tssr132444 15 84127357 to 84127366 9 + TSS region transcription start site region 132444
Tssr135706 15 84132035 to 84132040 5 - TSS region transcription start site region 135706
Tssr135707 15 84132063 to 84132077 14 - TSS region transcription start site region 135707
Gm33530 15 84164859 to 84165830 971 - lncRNA gene predicted gene, 33530
Cpgi7457 15 84167622 to 84168443 821 CpG island CpG island 7457
Tssr132445 15 84167761 to 84167772 11 + TSS region transcription start site region 132445
Tssr132446 15 84167804 to 84167824 20 + TSS region transcription start site region 132446
Tssr132447 15 84167827 to 84167843 16 + TSS region transcription start site region 132447
Pnpla3 15 84167837 to 84187236 19399 + protein coding gene patatin-like phospholipase domain containing 3
Mir6392 15 84168270 to 84168377 107 + miRNA gene microRNA 6392
Gm49513 15 84181914 to 84195881 13967 + unclassified non-coding RNA gene predicted gene, 49513
Gm20369 15 84182709 to 84183015 306 - pseudogene predicted gene, 20369
Tssr135708 15 84183058 to 84183074 16 - TSS region transcription start site region 135708
Tssr135709 15 84185064 to 84185105 41 - TSS region transcription start site region 135709
Tssr135710 15 84185152 to 84185156 4 - TSS region transcription start site region 135710
Tssr135711 15 84185165 to 84185176 11 - TSS region transcription start site region 135711
Cpgi7458 15 84191910 to 84192665 755 CpG island CpG island 7458
Tssr135712 15 84192106 to 84192157 51 - TSS region transcription start site region 135712
Tssr132448 15 84192223 to 84192260 37 + TSS region transcription start site region 132448
Samm50 15 84192233 to 84214303 22070 + protein coding gene SAMM50 sorting and assembly machinery component
Tssr132449 15 84192261 to 84192286 25 + TSS region transcription start site region 132449
Tssr132450 15 84192289 to 84192305 16 + TSS region transcription start site region 132450
Tssr135713 15 84217176 to 84217196 20 - TSS region transcription start site region 135713