Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83655960-84126133

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scube1 15 83604999 to 83725021 120022 - protein coding gene signal peptide, CUB domain, EGF-like 1
Cpgi7452 15 83724059 to 83725970 1911 CpG island CpG island 7452
Tssr135693 15 83724979 to 83725044 65 - TSS region transcription start site region 135693
Gm33324 15 83751856 to 83757018 5162 - lncRNA gene predicted gene, 33324
D15Mit33 15 83755739 to 83755886 147 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 33
Tssr132434 15 83772052 to 83772057 5 + TSS region transcription start site region 132434
Cpgi7453 15 83779218 to 83780742 1524 CpG island CpG island 7453
Mpped1 15 83779472 to 83858487 79015 + protein coding gene metallophosphoesterase domain containing 1
Tssr132435 15 83779975 to 83779988 13 + TSS region transcription start site region 132435
Tssr132436 15 83779999 to 83780033 34 + TSS region transcription start site region 132436
Tssr132437 15 83780034 to 83780086 52 + TSS region transcription start site region 132437
Tssr132438 15 83784326 to 83784348 22 + TSS region transcription start site region 132438
Tssr132439 15 83788944 to 83788981 37 + TSS region transcription start site region 132439
Tssr4673 15 83790437 to 83790441 4 + TSS region transcription start site region 4673
Tssr132440 15 83792142 to 83792153 11 + TSS region transcription start site region 132440
Gm41370 15 83847303 to 83856241 8938 - lncRNA gene predicted gene, 41370
Gm41372 15 83859169 to 83867632 8463 + lncRNA gene predicted gene, 41372
Efcab6 15 83866712 to 84065379 198667 - protein coding gene EF-hand calcium binding domain 6
D15Mit215 15 83890960 to 83891133 173 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 215
Tssr135694 15 83919364 to 83919387 23 - TSS region transcription start site region 135694
Tssr135695 15 83919392 to 83919399 7 - TSS region transcription start site region 135695
Tssr135696 15 83920171 to 83920189 18 - TSS region transcription start site region 135696
Tssr135697 15 83936074 to 83936081 7 - TSS region transcription start site region 135697
Tssr135698 15 83936082 to 83936104 22 - TSS region transcription start site region 135698
Cpgi7454 15 83998113 to 83998495 382 CpG island CpG island 7454
Rpl31-ps22 15 84030339 to 84030675 336 + pseudogene ribosomal protein L31, pseudogene 22
Tssr135699 15 84055071 to 84055099 28 - TSS region transcription start site region 135699
Tssr135700 15 84055103 to 84055110 7 - TSS region transcription start site region 135700
4933433M23Rik 15 84055207 to 84056590 1383 unclassified gene RIKEN cDNA 4933433M23 gene
Cpgi7455 15 84064939 to 84065475 536 CpG island CpG island 7455
Tssr135701 15 84065329 to 84065364 35 - TSS region transcription start site region 135701
Sult4a1 15 84076097 to 84105754 29657 - protein coding gene sulfotransferase family 4A, member 1
Tssr135702 15 84090643 to 84090672 29 - TSS region transcription start site region 135702
Cpgi7456 15 84104668 to 84106139 1471 CpG island CpG island 7456
Tssr135703 15 84105599 to 84105658 59 - TSS region transcription start site region 135703
Tssr135704 15 84105662 to 84105674 12 - TSS region transcription start site region 135704
Gm46526 15 84106658 to 84108851 2193 + lincRNA gene predicted gene, 46526
Pnpla5 15 84112356 to 84123175 10819 - protein coding gene patatin-like phospholipase domain containing 5
Tssr132441 15 84123116 to 84123117 1 + TSS region transcription start site region 132441
Tssr135705 15 84123174 to 84123203 29 - TSS region transcription start site region 135705