Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83504059-83945970

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttll1 15 83483769 to 83510893 27124 - protein coding gene tubulin tyrosine ligase-like 1
Cpgi7446 15 83510720 to 83511257 537 CpG island CpG island 7446
Tssr135683 15 83510837 to 83510859 22 - TSS region transcription start site region 135683
Tssr135684 15 83510861 to 83510906 45 - TSS region transcription start site region 135684
Gm24575 15 83516936 to 83517012 76 + miRNA gene predicted gene, 24575
Tssr135685 15 83518945 to 83518949 4 - TSS region transcription start site region 135685
Tssr132425 15 83523403 to 83523407 4 + TSS region transcription start site region 132425
Tssr132426 15 83523976 to 83523987 11 + TSS region transcription start site region 132426
Cpgi7447 15 83526332 to 83527521 1189 CpG island CpG island 7447
Tssr132427 15 83526854 to 83526874 20 + TSS region transcription start site region 132427
Bik 15 83526862 to 83544634 17772 + protein coding gene BCL2-interacting killer
Tssr132428 15 83526896 to 83526907 11 + TSS region transcription start site region 132428
Gm46495 15 83538139 to 83538676 537 - pseudogene predicted gene, 46495
Mcat 15 83546797 to 83555759 8962 - protein coding gene malonyl CoA:ACP acyltransferase (mitochondrial)
Cpgi7448 15 83555092 to 83555993 901 CpG island CpG island 7448
Tssr135686 15 83555681 to 83555743 62 - TSS region transcription start site region 135686
Cpgi7449 15 83562687 to 83562868 181 CpG island CpG island 7449
Tssr135687 15 83563022 to 83563042 20 - TSS region transcription start site region 135687
Cpgi7450 15 83563421 to 83564229 808 CpG island CpG island 7450
Tssr132429 15 83563571 to 83563580 9 + TSS region transcription start site region 132429
Tssr132430 15 83563583 to 83563620 37 + TSS region transcription start site region 132430
Tspo 15 83563592 to 83574203 10611 + protein coding gene translocator protein
Tssr132431 15 83565427 to 83565460 33 + TSS region transcription start site region 132431
Ttll12 15 83575094 to 83595157 20063 - protein coding gene tubulin tyrosine ligase-like family, member 12
Tssr135688 15 83580139 to 83580147 8 - TSS region transcription start site region 135688
Tssr132432 15 83592999 to 83593025 26 + TSS region transcription start site region 132432
Cpgi7451 15 83594382 to 83595387 1005 CpG island CpG island 7451
Tssr135689 15 83595077 to 83595082 5 - TSS region transcription start site region 135689
Tssr135690 15 83595111 to 83595162 51 - TSS region transcription start site region 135690
Tssr135691 15 83595166 to 83595177 11 - TSS region transcription start site region 135691
Tssr135692 15 83595196 to 83595207 11 - TSS region transcription start site region 135692
Tssr132433 15 83597035 to 83597039 4 + TSS region transcription start site region 132433
Scube1 15 83604999 to 83725021 120022 - protein coding gene signal peptide, CUB domain, EGF-like 1
Cpgi7452 15 83724059 to 83725970 1911 CpG island CpG island 7452
Tssr135693 15 83724979 to 83725044 65 - TSS region transcription start site region 135693
Gm33324 15 83751856 to 83757018 5162 - lncRNA gene predicted gene, 33324
D15Mit33 15 83755739 to 83755886 147 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 33
Tssr132434 15 83772052 to 83772057 5 + TSS region transcription start site region 132434
Cpgi7453 15 83779218 to 83780742 1524 CpG island CpG island 7453
Mpped1 15 83779472 to 83858487 79015 + protein coding gene metallophosphoesterase domain containing 1
Tssr132435 15 83779975 to 83779988 13 + TSS region transcription start site region 132435
Tssr132436 15 83779999 to 83780033 34 + TSS region transcription start site region 132436
Tssr132437 15 83780034 to 83780086 52 + TSS region transcription start site region 132437
Tssr132438 15 83784326 to 83784348 22 + TSS region transcription start site region 132438
Tssr132439 15 83788944 to 83788981 37 + TSS region transcription start site region 132439
Tssr4673 15 83790437 to 83790441 4 + TSS region transcription start site region 4673
Tssr132440 15 83792142 to 83792153 11 + TSS region transcription start site region 132440
Gm41370 15 83847303 to 83856241 8938 - lncRNA gene predicted gene, 41370
Gm41372 15 83859169 to 83867632 8463 + lncRNA gene predicted gene, 41372
Efcab6 15 83866712 to 84065379 198667 - protein coding gene EF-hand calcium binding domain 6
D15Mit215 15 83890960 to 83891133 173 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 215
Tssr135694 15 83919364 to 83919387 23 - TSS region transcription start site region 135694
Tssr135695 15 83919392 to 83919399 7 - TSS region transcription start site region 135695
Tssr135696 15 83920171 to 83920189 18 - TSS region transcription start site region 135696
Tssr135697 15 83936074 to 83936081 7 - TSS region transcription start site region 135697
Tssr135698 15 83936082 to 83936104 22 - TSS region transcription start site region 135698