Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83489382-83700387

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttll1 15 83483769 to 83510893 27124 - protein coding gene tubulin tyrosine ligase-like 1
Tssr135678 15 83489549 to 83489558 9 - TSS region transcription start site region 135678
Tssr135679 15 83489575 to 83489585 10 - TSS region transcription start site region 135679
Tssr135680 15 83489602 to 83489623 21 - TSS region transcription start site region 135680
Tssr135681 15 83489630 to 83489655 25 - TSS region transcription start site region 135681
Tssr135682 15 83489671 to 83489689 18 - TSS region transcription start site region 135682
Cpgi7445 15 83502159 to 83502345 186 CpG island CpG island 7445
Cpgi7446 15 83510720 to 83511257 537 CpG island CpG island 7446
Tssr135683 15 83510837 to 83510859 22 - TSS region transcription start site region 135683
Tssr135684 15 83510861 to 83510906 45 - TSS region transcription start site region 135684
Gm24575 15 83516936 to 83517012 76 + miRNA gene predicted gene, 24575
Tssr135685 15 83518945 to 83518949 4 - TSS region transcription start site region 135685
Tssr132425 15 83523403 to 83523407 4 + TSS region transcription start site region 132425
Tssr132426 15 83523976 to 83523987 11 + TSS region transcription start site region 132426
Cpgi7447 15 83526332 to 83527521 1189 CpG island CpG island 7447
Tssr132427 15 83526854 to 83526874 20 + TSS region transcription start site region 132427
Bik 15 83526862 to 83544634 17772 + protein coding gene BCL2-interacting killer
Tssr132428 15 83526896 to 83526907 11 + TSS region transcription start site region 132428
Gm46495 15 83538139 to 83538676 537 - pseudogene predicted gene, 46495
Mcat 15 83546797 to 83555759 8962 - protein coding gene malonyl CoA:ACP acyltransferase (mitochondrial)
Cpgi7448 15 83555092 to 83555993 901 CpG island CpG island 7448
Tssr135686 15 83555681 to 83555743 62 - TSS region transcription start site region 135686
Cpgi7449 15 83562687 to 83562868 181 CpG island CpG island 7449
Tssr135687 15 83563022 to 83563042 20 - TSS region transcription start site region 135687
Cpgi7450 15 83563421 to 83564229 808 CpG island CpG island 7450
Tssr132429 15 83563571 to 83563580 9 + TSS region transcription start site region 132429
Tssr132430 15 83563583 to 83563620 37 + TSS region transcription start site region 132430
Tspo 15 83563592 to 83574203 10611 + protein coding gene translocator protein
Tssr132431 15 83565427 to 83565460 33 + TSS region transcription start site region 132431
Ttll12 15 83575094 to 83595157 20063 - protein coding gene tubulin tyrosine ligase-like family, member 12
Tssr135688 15 83580139 to 83580147 8 - TSS region transcription start site region 135688
Tssr132432 15 83592999 to 83593025 26 + TSS region transcription start site region 132432
Cpgi7451 15 83594382 to 83595387 1005 CpG island CpG island 7451
Tssr135689 15 83595077 to 83595082 5 - TSS region transcription start site region 135689
Tssr135690 15 83595111 to 83595162 51 - TSS region transcription start site region 135690
Tssr135691 15 83595166 to 83595177 11 - TSS region transcription start site region 135691
Tssr135692 15 83595196 to 83595207 11 - TSS region transcription start site region 135692
Tssr132433 15 83597035 to 83597039 4 + TSS region transcription start site region 132433
Scube1 15 83604999 to 83725021 120022 - protein coding gene signal peptide, CUB domain, EGF-like 1