Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83342762-83453897

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arfgap3 15 83299739 to 83350247 50508 - protein coding gene ADP-ribosylation factor GTPase activating protein 3
Cpgi7442 15 83349670 to 83350687 1017 CpG island CpG island 7442
Tssr135655 15 83350151 to 83350262 111 - TSS region transcription start site region 135655
1700001L05Rik 15 83353847 to 83367282 13435 - lincRNA gene RIKEN cDNA 1700001L05 gene
Tssr135656 15 83355913 to 83355916 3 - TSS region transcription start site region 135656
Cpgi7443 15 83366759 to 83367627 868 CpG island CpG island 7443
Tssr135657 15 83366971 to 83366991 20 - TSS region transcription start site region 135657
Tssr135658 15 83367006 to 83367016 10 - TSS region transcription start site region 135658
Tssr135659 15 83367239 to 83367250 11 - TSS region transcription start site region 135659
Tssr135660 15 83367267 to 83367287 20 - TSS region transcription start site region 135660
Tssr135661 15 83367297 to 83367314 17 - TSS region transcription start site region 135661
Pacsin2 15 83375607 to 83464606 88999 - protein coding gene protein kinase C and casein kinase substrate in neurons 2
Tssr135662 15 83377337 to 83377356 19 - TSS region transcription start site region 135662
Tssr135663 15 83385777 to 83385795 18 - TSS region transcription start site region 135663
Gm41368 15 83386773 to 83392494 5721 + lncRNA gene predicted gene, 41368
Tssr132420 15 83389617 to 83389618 1 + TSS region transcription start site region 132420
Tssr135664 15 83393957 to 83393974 17 - TSS region transcription start site region 135664
Tssr132421 15 83394101 to 83394113 12 + TSS region transcription start site region 132421
Tssr132422 15 83394116 to 83394123 7 + TSS region transcription start site region 132422
1700082O11Rik 15 83394125 to 83394561 436 unclassified gene RIKEN cDNA 1700082O11 gene
C430045I18Rik 15 83397762 to 83398897 1135 unclassified gene RIKEN cDNA C430045I18 gene
Gm5417 15 83405626 to 83406063 437 - pseudogene predicted gene 5417
Tssr135665 15 83416916 to 83416918 2 - TSS region transcription start site region 135665
Tssr135666 15 83423742 to 83423751 9 - TSS region transcription start site region 135666
Tssr135667 15 83423759 to 83423770 11 - TSS region transcription start site region 135667
Tssr135668 15 83423780 to 83423793 13 - TSS region transcription start site region 135668
Tssr135669 15 83432794 to 83432813 19 - TSS region transcription start site region 135669
Tssr135670 15 83432819 to 83432859 40 - TSS region transcription start site region 135670
Tssr135671 15 83447860 to 83447876 16 - TSS region transcription start site region 135671
Tssr135672 15 83447916 to 83447942 26 - TSS region transcription start site region 135672
Tssr135673 15 83447983 to 83447992 9 - TSS region transcription start site region 135673