Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83258403-83788407

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C130064B19Rik 15 83258659 to 83259523 864 - lncRNA gene RIKEN cDNA C130064B19 gene
Tssr135652 15 83265938 to 83265953 15 - TSS region transcription start site region 135652
Gm32788 15 83270951 to 83296786 25835 - lncRNA gene predicted gene, 32788
Arfgap3 15 83299739 to 83350247 50508 - protein coding gene ADP-ribosylation factor GTPase activating protein 3
Tssr135653 15 83313508 to 83313523 15 - TSS region transcription start site region 135653
Tssr135654 15 83313582 to 83313595 13 - TSS region transcription start site region 135654
Tssr132419 15 83316580 to 83316606 26 + TSS region transcription start site region 132419
Cpgi7442 15 83349670 to 83350687 1017 CpG island CpG island 7442
Tssr135655 15 83350151 to 83350262 111 - TSS region transcription start site region 135655
1700001L05Rik 15 83353847 to 83367282 13435 - lincRNA gene RIKEN cDNA 1700001L05 gene
Tssr135656 15 83355913 to 83355916 3 - TSS region transcription start site region 135656
Cpgi7443 15 83366759 to 83367627 868 CpG island CpG island 7443
Tssr135657 15 83366971 to 83366991 20 - TSS region transcription start site region 135657
Tssr135658 15 83367006 to 83367016 10 - TSS region transcription start site region 135658
Tssr135659 15 83367239 to 83367250 11 - TSS region transcription start site region 135659
Tssr135660 15 83367267 to 83367287 20 - TSS region transcription start site region 135660
Tssr135661 15 83367297 to 83367314 17 - TSS region transcription start site region 135661
Pacsin2 15 83375607 to 83464606 88999 - protein coding gene protein kinase C and casein kinase substrate in neurons 2
Tssr135662 15 83377337 to 83377356 19 - TSS region transcription start site region 135662
Tssr135663 15 83385777 to 83385795 18 - TSS region transcription start site region 135663
Gm41368 15 83386773 to 83392494 5721 + lncRNA gene predicted gene, 41368
Tssr132420 15 83389617 to 83389618 1 + TSS region transcription start site region 132420
Tssr135664 15 83393957 to 83393974 17 - TSS region transcription start site region 135664
Tssr132421 15 83394101 to 83394113 12 + TSS region transcription start site region 132421
Tssr132422 15 83394116 to 83394123 7 + TSS region transcription start site region 132422
1700082O11Rik 15 83394125 to 83394561 436 unclassified gene RIKEN cDNA 1700082O11 gene
C430045I18Rik 15 83397762 to 83398897 1135 unclassified gene RIKEN cDNA C430045I18 gene
Gm5417 15 83405626 to 83406063 437 - pseudogene predicted gene 5417
Tssr135665 15 83416916 to 83416918 2 - TSS region transcription start site region 135665
Tssr135666 15 83423742 to 83423751 9 - TSS region transcription start site region 135666
Tssr135667 15 83423759 to 83423770 11 - TSS region transcription start site region 135667
Tssr135668 15 83423780 to 83423793 13 - TSS region transcription start site region 135668
Tssr135669 15 83432794 to 83432813 19 - TSS region transcription start site region 135669
Tssr135670 15 83432819 to 83432859 40 - TSS region transcription start site region 135670
Tssr135671 15 83447860 to 83447876 16 - TSS region transcription start site region 135671
Tssr135672 15 83447916 to 83447942 26 - TSS region transcription start site region 135672
Tssr135673 15 83447983 to 83447992 9 - TSS region transcription start site region 135673
Cpgi7444 15 83463795 to 83465097 1302 CpG island CpG island 7444
Tssr135674 15 83464534 to 83464563 29 - TSS region transcription start site region 135674
Tssr135675 15 83464576 to 83464591 15 - TSS region transcription start site region 135675
Tssr135676 15 83464595 to 83464614 19 - TSS region transcription start site region 135676
Tssr132423 15 83464814 to 83464817 3 + TSS region transcription start site region 132423
D15Mit198 15 83468735 to 83468863 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 198
Tssr4672 15 83474086 to 83474106 20 - TSS region transcription start site region 4672
Tssr132424 15 83474668 to 83474674 6 + TSS region transcription start site region 132424
Ttll1 15 83483769 to 83510893 27124 - protein coding gene tubulin tyrosine ligase-like 1
Tssr135677 15 83484017 to 83484042 25 - TSS region transcription start site region 135677
Tssr135678 15 83489549 to 83489558 9 - TSS region transcription start site region 135678
Tssr135679 15 83489575 to 83489585 10 - TSS region transcription start site region 135679
Tssr135680 15 83489602 to 83489623 21 - TSS region transcription start site region 135680
Tssr135681 15 83489630 to 83489655 25 - TSS region transcription start site region 135681
Tssr135682 15 83489671 to 83489689 18 - TSS region transcription start site region 135682
Cpgi7445 15 83502159 to 83502345 186 CpG island CpG island 7445
Cpgi7446 15 83510720 to 83511257 537 CpG island CpG island 7446
Tssr135683 15 83510837 to 83510859 22 - TSS region transcription start site region 135683
Tssr135684 15 83510861 to 83510906 45 - TSS region transcription start site region 135684
Gm24575 15 83516936 to 83517012 76 + miRNA gene predicted gene, 24575
Tssr135685 15 83518945 to 83518949 4 - TSS region transcription start site region 135685
Tssr132425 15 83523403 to 83523407 4 + TSS region transcription start site region 132425
Tssr132426 15 83523976 to 83523987 11 + TSS region transcription start site region 132426
Cpgi7447 15 83526332 to 83527521 1189 CpG island CpG island 7447
Tssr132427 15 83526854 to 83526874 20 + TSS region transcription start site region 132427
Bik 15 83526862 to 83544634 17772 + protein coding gene BCL2-interacting killer
Tssr132428 15 83526896 to 83526907 11 + TSS region transcription start site region 132428
Gm46495 15 83538139 to 83538676 537 - pseudogene predicted gene, 46495
Mcat 15 83546797 to 83555759 8962 - protein coding gene malonyl CoA:ACP acyltransferase (mitochondrial)
Cpgi7448 15 83555092 to 83555993 901 CpG island CpG island 7448
Tssr135686 15 83555681 to 83555743 62 - TSS region transcription start site region 135686
Cpgi7449 15 83562687 to 83562868 181 CpG island CpG island 7449
Tssr135687 15 83563022 to 83563042 20 - TSS region transcription start site region 135687
Cpgi7450 15 83563421 to 83564229 808 CpG island CpG island 7450
Tssr132429 15 83563571 to 83563580 9 + TSS region transcription start site region 132429
Tssr132430 15 83563583 to 83563620 37 + TSS region transcription start site region 132430
Tspo 15 83563592 to 83574203 10611 + protein coding gene translocator protein
Tssr132431 15 83565427 to 83565460 33 + TSS region transcription start site region 132431
Ttll12 15 83575094 to 83595157 20063 - protein coding gene tubulin tyrosine ligase-like family, member 12
Tssr135688 15 83580139 to 83580147 8 - TSS region transcription start site region 135688
Tssr132432 15 83592999 to 83593025 26 + TSS region transcription start site region 132432
Cpgi7451 15 83594382 to 83595387 1005 CpG island CpG island 7451
Tssr135689 15 83595077 to 83595082 5 - TSS region transcription start site region 135689
Tssr135690 15 83595111 to 83595162 51 - TSS region transcription start site region 135690
Tssr135691 15 83595166 to 83595177 11 - TSS region transcription start site region 135691
Tssr135692 15 83595196 to 83595207 11 - TSS region transcription start site region 135692
Tssr132433 15 83597035 to 83597039 4 + TSS region transcription start site region 132433
Scube1 15 83604999 to 83725021 120022 - protein coding gene signal peptide, CUB domain, EGF-like 1
Cpgi7452 15 83724059 to 83725970 1911 CpG island CpG island 7452
Tssr135693 15 83724979 to 83725044 65 - TSS region transcription start site region 135693
Gm33324 15 83751856 to 83757018 5162 - lncRNA gene predicted gene, 33324
D15Mit33 15 83755739 to 83755886 147 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 33
Tssr132434 15 83772052 to 83772057 5 + TSS region transcription start site region 132434
Cpgi7453 15 83779218 to 83780742 1524 CpG island CpG island 7453
Mpped1 15 83779472 to 83858487 79015 + protein coding gene metallophosphoesterase domain containing 1
Tssr132435 15 83779975 to 83779988 13 + TSS region transcription start site region 132435
Tssr132436 15 83779999 to 83780033 34 + TSS region transcription start site region 132436
Tssr132437 15 83780034 to 83780086 52 + TSS region transcription start site region 132437
Tssr132438 15 83784326 to 83784348 22 + TSS region transcription start site region 132438