Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83216580-83416606

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr132418 15 83220521 to 83220556 35 + TSS region transcription start site region 132418
A4galt 15 83226722 to 83251774 25052 - protein coding gene alpha 1,4-galactosyltransferase
Tssr135650 15 83237962 to 83237984 22 - TSS region transcription start site region 135650
Cpgi7441 15 83250993 to 83252347 1354 CpG island CpG island 7441
Tssr135651 15 83251720 to 83251736 16 - TSS region transcription start site region 135651
Gm41367 15 83255629 to 83257764 2135 - lncRNA gene predicted gene, 41367
Gm32886 15 83257948 to 83258097 149 - protein coding gene predicted gene, 32886
C130064B19Rik 15 83258659 to 83259523 864 - lncRNA gene RIKEN cDNA C130064B19 gene
Tssr135652 15 83265938 to 83265953 15 - TSS region transcription start site region 135652
Gm32788 15 83270951 to 83296786 25835 - lncRNA gene predicted gene, 32788
Arfgap3 15 83299739 to 83350247 50508 - protein coding gene ADP-ribosylation factor GTPase activating protein 3
Tssr135653 15 83313508 to 83313523 15 - TSS region transcription start site region 135653
Tssr135654 15 83313582 to 83313595 13 - TSS region transcription start site region 135654
Tssr132419 15 83316580 to 83316606 26 + TSS region transcription start site region 132419
Cpgi7442 15 83349670 to 83350687 1017 CpG island CpG island 7442
Tssr135655 15 83350151 to 83350262 111 - TSS region transcription start site region 135655
1700001L05Rik 15 83353847 to 83367282 13435 - lincRNA gene RIKEN cDNA 1700001L05 gene
Tssr135656 15 83355913 to 83355916 3 - TSS region transcription start site region 135656
Cpgi7443 15 83366759 to 83367627 868 CpG island CpG island 7443
Tssr135657 15 83366971 to 83366991 20 - TSS region transcription start site region 135657
Tssr135658 15 83367006 to 83367016 10 - TSS region transcription start site region 135658
Tssr135659 15 83367239 to 83367250 11 - TSS region transcription start site region 135659
Tssr135660 15 83367267 to 83367287 20 - TSS region transcription start site region 135660
Tssr135661 15 83367297 to 83367314 17 - TSS region transcription start site region 135661
Pacsin2 15 83375607 to 83464606 88999 - protein coding gene protein kinase C and casein kinase substrate in neurons 2
Tssr135662 15 83377337 to 83377356 19 - TSS region transcription start site region 135662
Tssr135663 15 83385777 to 83385795 18 - TSS region transcription start site region 135663
Gm41368 15 83386773 to 83392494 5721 + lncRNA gene predicted gene, 41368
Tssr132420 15 83389617 to 83389618 1 + TSS region transcription start site region 132420
Tssr135664 15 83393957 to 83393974 17 - TSS region transcription start site region 135664
Tssr132421 15 83394101 to 83394113 12 + TSS region transcription start site region 132421
Tssr132422 15 83394116 to 83394123 7 + TSS region transcription start site region 132422
1700082O11Rik 15 83394125 to 83394561 436 unclassified gene RIKEN cDNA 1700082O11 gene
C430045I18Rik 15 83397762 to 83398897 1135 unclassified gene RIKEN cDNA C430045I18 gene
Gm5417 15 83405626 to 83406063 437 - pseudogene predicted gene 5417