Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83170951-83396786

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyb5r3 15 83153495 to 83172208 18713 - protein coding gene cytochrome b5 reductase 3
Cpgi7440 15 83171568 to 83172829 1261 CpG island CpG island 7440
Tssr135645 15 83172166 to 83172207 41 - TSS region transcription start site region 135645
Tssr135646 15 83172212 to 83172235 23 - TSS region transcription start site region 135646
Tssr135647 15 83172237 to 83172248 11 - TSS region transcription start site region 135647
Tssr132417 15 83172310 to 83172406 96 + TSS region transcription start site region 132417
Gm49463 15 83172350 to 83174808 2458 + antisense lncRNA gene predicted gene, 49463
Tssr135648 15 83173007 to 83173023 16 - TSS region transcription start site region 135648
7530414M10Rik 15 83173196 to 83176445 3249 - lincRNA gene RIKEN cDNA 7530414M10 gene
Tssr135649 15 83174250 to 83174276 26 - TSS region transcription start site region 135649
Tssr132418 15 83220521 to 83220556 35 + TSS region transcription start site region 132418
A4galt 15 83226722 to 83251774 25052 - protein coding gene alpha 1,4-galactosyltransferase
Tssr135650 15 83237962 to 83237984 22 - TSS region transcription start site region 135650
Cpgi7441 15 83250993 to 83252347 1354 CpG island CpG island 7441
Tssr135651 15 83251720 to 83251736 16 - TSS region transcription start site region 135651
Gm41367 15 83255629 to 83257764 2135 - lncRNA gene predicted gene, 41367
Gm32886 15 83257948 to 83258097 149 - protein coding gene predicted gene, 32886
C130064B19Rik 15 83258659 to 83259523 864 - lncRNA gene RIKEN cDNA C130064B19 gene
Tssr135652 15 83265938 to 83265953 15 - TSS region transcription start site region 135652
Gm32788 15 83270951 to 83296786 25835 - lncRNA gene predicted gene, 32788
Arfgap3 15 83299739 to 83350247 50508 - protein coding gene ADP-ribosylation factor GTPase activating protein 3
Tssr135653 15 83313508 to 83313523 15 - TSS region transcription start site region 135653
Tssr135654 15 83313582 to 83313595 13 - TSS region transcription start site region 135654
Tssr132419 15 83316580 to 83316606 26 + TSS region transcription start site region 132419
Cpgi7442 15 83349670 to 83350687 1017 CpG island CpG island 7442
Tssr135655 15 83350151 to 83350262 111 - TSS region transcription start site region 135655
1700001L05Rik 15 83353847 to 83367282 13435 - lincRNA gene RIKEN cDNA 1700001L05 gene
Tssr135656 15 83355913 to 83355916 3 - TSS region transcription start site region 135656
Cpgi7443 15 83366759 to 83367627 868 CpG island CpG island 7443
Tssr135657 15 83366971 to 83366991 20 - TSS region transcription start site region 135657
Tssr135658 15 83367006 to 83367016 10 - TSS region transcription start site region 135658
Tssr135659 15 83367239 to 83367250 11 - TSS region transcription start site region 135659
Tssr135660 15 83367267 to 83367287 20 - TSS region transcription start site region 135660
Tssr135661 15 83367297 to 83367314 17 - TSS region transcription start site region 135661
Pacsin2 15 83375607 to 83464606 88999 - protein coding gene protein kinase C and casein kinase substrate in neurons 2
Tssr135662 15 83377337 to 83377356 19 - TSS region transcription start site region 135662
Tssr135663 15 83385777 to 83385795 18 - TSS region transcription start site region 135663
Gm41368 15 83386773 to 83392494 5721 + lncRNA gene predicted gene, 41368
Tssr132420 15 83389617 to 83389618 1 + TSS region transcription start site region 132420
Tssr135664 15 83393957 to 83393974 17 - TSS region transcription start site region 135664
Tssr132421 15 83394101 to 83394113 12 + TSS region transcription start site region 132421
Tssr132422 15 83394116 to 83394123 7 + TSS region transcription start site region 132422
1700082O11Rik 15 83394125 to 83394561 436 unclassified gene RIKEN cDNA 1700082O11 gene