Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83149739-83500247

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnu12 15 83149645 to 83149794 149 + snRNA gene RNA U12, small nuclear
Cyb5r3 15 83153495 to 83172208 18713 - protein coding gene cytochrome b5 reductase 3
Tssr132415 15 83154202 to 83154221 19 + TSS region transcription start site region 132415
Tssr135629 15 83154261 to 83154324 63 - TSS region transcription start site region 135629
Tssr135630 15 83154325 to 83154378 53 - TSS region transcription start site region 135630
Tssr135631 15 83154391 to 83154402 11 - TSS region transcription start site region 135631
Tssr135632 15 83154416 to 83154435 19 - TSS region transcription start site region 135632
Tssr135633 15 83154475 to 83154495 20 - TSS region transcription start site region 135633
Tssr135634 15 83154522 to 83154547 25 - TSS region transcription start site region 135634
Tssr135635 15 83154580 to 83154590 10 - TSS region transcription start site region 135635
Tssr135636 15 83154671 to 83154680 9 - TSS region transcription start site region 135636
Tssr135637 15 83158858 to 83158894 36 - TSS region transcription start site region 135637
Tssr135638 15 83158902 to 83158930 28 - TSS region transcription start site region 135638
Tssr135639 15 83160902 to 83160915 13 - TSS region transcription start site region 135639
Tssr135640 15 83162264 to 83162305 41 - TSS region transcription start site region 135640
Tssr132416 15 83166067 to 83166086 19 + TSS region transcription start site region 132416
Tssr135641 15 83166102 to 83166160 58 - TSS region transcription start site region 135641
Tssr135642 15 83166869 to 83166883 14 - TSS region transcription start site region 135642
Tssr135643 15 83170168 to 83170186 18 - TSS region transcription start site region 135643
Tssr135644 15 83170498 to 83170515 17 - TSS region transcription start site region 135644
Cpgi7440 15 83171568 to 83172829 1261 CpG island CpG island 7440
Tssr135645 15 83172166 to 83172207 41 - TSS region transcription start site region 135645
Tssr135646 15 83172212 to 83172235 23 - TSS region transcription start site region 135646
Tssr135647 15 83172237 to 83172248 11 - TSS region transcription start site region 135647
Tssr132417 15 83172310 to 83172406 96 + TSS region transcription start site region 132417
Gm49463 15 83172350 to 83174808 2458 + antisense lncRNA gene predicted gene, 49463
Tssr135648 15 83173007 to 83173023 16 - TSS region transcription start site region 135648
7530414M10Rik 15 83173196 to 83176445 3249 - lincRNA gene RIKEN cDNA 7530414M10 gene
Tssr135649 15 83174250 to 83174276 26 - TSS region transcription start site region 135649
Tssr132418 15 83220521 to 83220556 35 + TSS region transcription start site region 132418
A4galt 15 83226722 to 83251774 25052 - protein coding gene alpha 1,4-galactosyltransferase
Tssr135650 15 83237962 to 83237984 22 - TSS region transcription start site region 135650
Cpgi7441 15 83250993 to 83252347 1354 CpG island CpG island 7441
Tssr135651 15 83251720 to 83251736 16 - TSS region transcription start site region 135651
Gm41367 15 83255629 to 83257764 2135 - lncRNA gene predicted gene, 41367
Gm32886 15 83257948 to 83258097 149 - protein coding gene predicted gene, 32886
C130064B19Rik 15 83258659 to 83259523 864 - lncRNA gene RIKEN cDNA C130064B19 gene
Tssr135652 15 83265938 to 83265953 15 - TSS region transcription start site region 135652
Gm32788 15 83270951 to 83296786 25835 - lncRNA gene predicted gene, 32788
Arfgap3 15 83299739 to 83350247 50508 - protein coding gene ADP-ribosylation factor GTPase activating protein 3
Tssr135653 15 83313508 to 83313523 15 - TSS region transcription start site region 135653
Tssr135654 15 83313582 to 83313595 13 - TSS region transcription start site region 135654
Tssr132419 15 83316580 to 83316606 26 + TSS region transcription start site region 132419
Cpgi7442 15 83349670 to 83350687 1017 CpG island CpG island 7442
Tssr135655 15 83350151 to 83350262 111 - TSS region transcription start site region 135655
1700001L05Rik 15 83353847 to 83367282 13435 - lincRNA gene RIKEN cDNA 1700001L05 gene
Tssr135656 15 83355913 to 83355916 3 - TSS region transcription start site region 135656
Cpgi7443 15 83366759 to 83367627 868 CpG island CpG island 7443
Tssr135657 15 83366971 to 83366991 20 - TSS region transcription start site region 135657
Tssr135658 15 83367006 to 83367016 10 - TSS region transcription start site region 135658
Tssr135659 15 83367239 to 83367250 11 - TSS region transcription start site region 135659
Tssr135660 15 83367267 to 83367287 20 - TSS region transcription start site region 135660
Tssr135661 15 83367297 to 83367314 17 - TSS region transcription start site region 135661
Pacsin2 15 83375607 to 83464606 88999 - protein coding gene protein kinase C and casein kinase substrate in neurons 2
Tssr135662 15 83377337 to 83377356 19 - TSS region transcription start site region 135662
Tssr135663 15 83385777 to 83385795 18 - TSS region transcription start site region 135663
Gm41368 15 83386773 to 83392494 5721 + lncRNA gene predicted gene, 41368
Tssr132420 15 83389617 to 83389618 1 + TSS region transcription start site region 132420
Tssr135664 15 83393957 to 83393974 17 - TSS region transcription start site region 135664
Tssr132421 15 83394101 to 83394113 12 + TSS region transcription start site region 132421
Tssr132422 15 83394116 to 83394123 7 + TSS region transcription start site region 132422
1700082O11Rik 15 83394125 to 83394561 436 unclassified gene RIKEN cDNA 1700082O11 gene
C430045I18Rik 15 83397762 to 83398897 1135 unclassified gene RIKEN cDNA C430045I18 gene
Gm5417 15 83405626 to 83406063 437 - pseudogene predicted gene 5417
Tssr135665 15 83416916 to 83416918 2 - TSS region transcription start site region 135665
Tssr135666 15 83423742 to 83423751 9 - TSS region transcription start site region 135666
Tssr135667 15 83423759 to 83423770 11 - TSS region transcription start site region 135667
Tssr135668 15 83423780 to 83423793 13 - TSS region transcription start site region 135668
Tssr135669 15 83432794 to 83432813 19 - TSS region transcription start site region 135669
Tssr135670 15 83432819 to 83432859 40 - TSS region transcription start site region 135670
Tssr135671 15 83447860 to 83447876 16 - TSS region transcription start site region 135671
Tssr135672 15 83447916 to 83447942 26 - TSS region transcription start site region 135672
Tssr135673 15 83447983 to 83447992 9 - TSS region transcription start site region 135673
Cpgi7444 15 83463795 to 83465097 1302 CpG island CpG island 7444
Tssr135674 15 83464534 to 83464563 29 - TSS region transcription start site region 135674
Tssr135675 15 83464576 to 83464591 15 - TSS region transcription start site region 135675
Tssr135676 15 83464595 to 83464614 19 - TSS region transcription start site region 135676
Tssr132423 15 83464814 to 83464817 3 + TSS region transcription start site region 132423
D15Mit198 15 83468735 to 83468863 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 198
Tssr4672 15 83474086 to 83474106 20 - TSS region transcription start site region 4672
Tssr132424 15 83474668 to 83474674 6 + TSS region transcription start site region 132424
Ttll1 15 83483769 to 83510893 27124 - protein coding gene tubulin tyrosine ligase-like 1
Tssr135677 15 83484017 to 83484042 25 - TSS region transcription start site region 135677
Tssr135678 15 83489549 to 83489558 9 - TSS region transcription start site region 135678
Tssr135679 15 83489575 to 83489585 10 - TSS region transcription start site region 135679
Tssr135680 15 83489602 to 83489623 21 - TSS region transcription start site region 135680
Tssr135681 15 83489630 to 83489655 25 - TSS region transcription start site region 135681
Tssr135682 15 83489671 to 83489689 18 - TSS region transcription start site region 135682