Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:82623923-83003927

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49431 15 82621092 to 82660905 39813 + antisense lncRNA gene predicted gene, 49431
Cyp2d13 15 82636750 to 82642045 5295 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 13
Brm2 15 82641175 to 82641298 123 QTL brachyury modifier 2
D15Mit189 15 82641175 to 82641298 123 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 189
Gm27463 15 82641945 to 82642001 56 - miRNA gene predicted gene, 27463
Tssr135559 15 82642035 to 82642052 17 - TSS region transcription start site region 135559
Tssr132400 15 82642151 to 82642168 17 + TSS region transcription start site region 132400
Tssr132401 15 82642181 to 82642194 13 + TSS region transcription start site region 132401
Cyp2d35-ps 15 82649917 to 82654711 4794 - pseudogene cytochrome P450, family 2, subfamily d, member 35, pseudogene
Tssr4671 15 82662298 to 82662302 4 - TSS region transcription start site region 4671
Cyp2d36-ps 15 82671288 to 82683257 11969 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 36, pseudogene
Tssr135560 15 82687694 to 82687699 5 - TSS region transcription start site region 135560
Cyp2d37-ps 15 82688750 to 82690058 1308 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 37, pseudogene
Tssr135561 15 82693062 to 82693082 20 - TSS region transcription start site region 135561
Tssr135562 15 82693091 to 82693114 23 - TSS region transcription start site region 135562
Cyp2d38-ps 15 82705575 to 82707270 1695 - pseudogene cytochrome P450, family 2, subfamily d, member 38, pseudogene
Tssr135563 15 82707356 to 82707375 19 - TSS region transcription start site region 135563
Cyp2d39-ps 15 82716007 to 82719416 3409 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 39, pseudogene
Gm49433 15 82741807 to 82742116 309 - pseudogene predicted gene, 49433
Cyp2d40 15 82759833 to 82764122 4289 - protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 40
Tssr135564 15 82764176 to 82764192 16 - TSS region transcription start site region 135564
Cyp2d41-ps 15 82777931 to 82782110 4179 - pseudogene cytochrome P450, family 2, subfamily d, member 41, pseudogene
Gm27618 15 82782082 to 82782141 59 - miRNA gene predicted gene, 27618
Tssr135565 15 82782179 to 82782184 5 - TSS region transcription start site region 135565
Cyp2d26 15 82790101 to 82794294 4193 - protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 26
Tssr135566 15 82791045 to 82791058 13 - TSS region transcription start site region 135566
Tssr135567 15 82791083 to 82791093 10 - TSS region transcription start site region 135567
Tssr135568 15 82791116 to 82791133 17 - TSS region transcription start site region 135568
Tssr135569 15 82792570 to 82792580 10 - TSS region transcription start site region 135569
Tssr135570 15 82792614 to 82792622 8 - TSS region transcription start site region 135570
Tssr135571 15 82792624 to 82792636 12 - TSS region transcription start site region 135571
Tssr135572 15 82792925 to 82792940 15 - TSS region transcription start site region 135572
Tssr135573 15 82793166 to 82793195 29 - TSS region transcription start site region 135573
Tssr135574 15 82794201 to 82794223 22 - TSS region transcription start site region 135574
Tssr135575 15 82794236 to 82794260 24 - TSS region transcription start site region 135575
Tssr135576 15 82794267 to 82794284 17 - TSS region transcription start site region 135576
Tssr135577 15 82794289 to 82794300 11 - TSS region transcription start site region 135577
Tssr135578 15 82794446 to 82794462 16 - TSS region transcription start site region 135578
Tssr135579 15 82794474 to 82794484 10 - TSS region transcription start site region 135579
Tssr135580 15 82794872 to 82794906 34 - TSS region transcription start site region 135580
Gm49435 15 82800973 to 82803964 2991 - pseudogene predicted gene, 49435
Tssr135581 15 82806813 to 82806815 2 - TSS region transcription start site region 135581
Tcf20 15 82808436 to 82987872 179436 - protein coding gene transcription factor 20
Tssr135582 15 82813923 to 82813927 4 - TSS region transcription start site region 135582
Tssr135583 15 82832516 to 82832519 3 - TSS region transcription start site region 135583
Tssr135584 15 82836578 to 82836582 4 - TSS region transcription start site region 135584
Tssr135585 15 82847865 to 82847868 3 - TSS region transcription start site region 135585
Tssr135586 15 82852656 to 82852672 16 - TSS region transcription start site region 135586
Tssr135587 15 82852684 to 82852719 35 - TSS region transcription start site region 135587
Tssr135588 15 82852724 to 82852737 13 - TSS region transcription start site region 135588
Tssr135589 15 82870836 to 82870842 6 - TSS region transcription start site region 135589
Tssr135590 15 82884385 to 82884388 3 - TSS region transcription start site region 135590
Tssr135591 15 82886703 to 82886707 4 - TSS region transcription start site region 135591
Tssr135592 15 82889201 to 82889203 2 - TSS region transcription start site region 135592
Tbrg3 15 82890483 to 82898461 7978 - lncRNA gene transforming growth factor beta regulated gene 3
Cpgi7423 15 82898707 to 82900485 1778 CpG island CpG island 7423
Tssr132402 15 82899018 to 82899035 17 + TSS region transcription start site region 132402
Tssr132403 15 82899039 to 82899058 19 + TSS region transcription start site region 132403
Tssr132404 15 82899060 to 82899082 22 + TSS region transcription start site region 132404
Gm20324 15 82899080 to 82905816 6736 + antisense lncRNA gene predicted gene, 20324
Tssr135593 15 82899741 to 82899776 35 - TSS region transcription start site region 135593
Tssr135594 15 82899779 to 82899823 44 - TSS region transcription start site region 135594
Tssr135595 15 82899834 to 82899845 11 - TSS region transcription start site region 135595
Cpgi7424 15 82911485 to 82912287 802 CpG island CpG island 7424
Tssr135596 15 82912143 to 82912190 47 - TSS region transcription start site region 135596
Cpgi7425 15 82917450 to 82917693 243 CpG island CpG island 7425
Cpgi7426 15 82938219 to 82938418 199 CpG island CpG island 7426
Cpgi7427 15 82952350 to 82952631 281 CpG island CpG island 7427
Mir3080 15 82959218 to 82959296 78 - miRNA gene microRNA 3080
Cpgi7428 15 82961057 to 82961413 356 CpG island CpG island 7428
Cpgi7430 15 82962825 to 82964623 1798 CpG island CpG island 7430
Tssr135597 15 82963748 to 82963765 17 - TSS region transcription start site region 135597
Tssr135598 15 82963780 to 82963865 85 - TSS region transcription start site region 135598
Cpgi7431 15 82968393 to 82968754 361 CpG island CpG island 7431
Gm29019 15 82982725 to 82987830 5105 - lincRNA gene predicted gene 29019
AW121686 15 82982870 to 82989134 6264 + lincRNA gene expressed sequence AW121686
Cpgi7432 15 82987108 to 82988010 902 CpG island CpG island 7432
Tssr135599 15 82987678 to 82987690 12 - TSS region transcription start site region 135599
Tssr135600 15 82987693 to 82987705 12 - TSS region transcription start site region 135600
Tssr135601 15 82987833 to 82987866 33 - TSS region transcription start site region 135601
Tssr135602 15 82987876 to 82987890 14 - TSS region transcription start site region 135602
Tssr135603 15 82993962 to 82993965 3 - TSS region transcription start site region 135603
Tssr135604 15 82995051 to 82995053 2 - TSS region transcription start site region 135604
Nfam1 15 82996736 to 83033397 36661 - protein coding gene Nfat activating molecule with ITAM motif 1
Tssr135605 15 82998574 to 82998610 36 - TSS region transcription start site region 135605
Tssr135606 15 82998916 to 82998930 14 - TSS region transcription start site region 135606
Tssr135607 15 82998931 to 82998953 22 - TSS region transcription start site region 135607
Tssr135608 15 82998988 to 82999023 35 - TSS region transcription start site region 135608
Tssr135609 15 82999054 to 82999088 34 - TSS region transcription start site region 135609